Sphingobium amiense: SAMIE_1035170
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Entry
SAMIE_1035170 CDS
T06684
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sami
Sphingobium amiense
Pathway
sami00260
Glycine, serine and threonine metabolism
sami00460
Cyanoamino acid metabolism
sami00630
Glyoxylate and dicarboxylate metabolism
sami00670
One carbon pool by folate
sami00680
Methane metabolism
sami01100
Metabolic pathways
sami01110
Biosynthesis of secondary metabolites
sami01120
Microbial metabolism in diverse environments
sami01200
Carbon metabolism
sami01230
Biosynthesis of amino acids
sami01240
Biosynthesis of cofactors
sami04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAMIE_1035170
09102 Energy metabolism
00680 Methane metabolism
SAMIE_1035170
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAMIE_1035170
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SAMIE_1035170
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SAMIE_1035170
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SAMIE_1035170
Enzymes [BR:
sami01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SAMIE_1035170
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Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BBE00017
UniProt:
A0A494W9K4
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Position
complement(4115859..4117163)
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AA seq
434 aa
AA seq
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MATSRAPHAVQKIENAGVSAAGLSLADDAVAVAIANEKIRQRESIELIASENFVSQAVLD
AQGSVLTNKYAEGYPHRRYYGGCVNVDVVEDLAIARVNQLFGSAHANVQPHSGSQANQAV
FLALLTPGDTILGLDLKAGGHLTHGAPVNMSGRWFNVVSYGVDPETHRIDMDQVAALAHQ
HRPKLLIAGGSAYPRVMDFARFRQIADDVGAVLLVDMAHFAGLVAGGVYPSPVPFADVVT
STTHKTLRGPRGGFVLTNDAEIAKKINSATFPGLQGGPLMHVIAAKAVAFGEALQPSFKT
YTQAVVENCRVLAQALSDGGLKITSGGTDCHLAVVDLRPFGATGNVAEKALESVGITLNK
NAIPNDPEKPMVTSGIRVGTAAGTSRGFGVDEYREIAALILDTLHAVRAGTLDADRQGIN
ARVRQLVARFPLPY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggccacatctcgagcgccgcacgcagttcagaagatcgaaaacgcaggcgtgagcgct
gccggtttgtcgctcgccgatgacgccgttgctgttgcgatcgccaatgagaagattcgc
cagcgcgagtccatcgaactgatcgcctcggagaatttcgtgagccaggcggttctcgat
gcgcagggctccgttctcaccaacaaatatgccgaaggctatccgcaccgccgctactat
ggcggctgcgtgaatgtggatgttgtcgaggatttggcgattgcgcgcgtgaaccagctt
ttcggcagcgctcacgccaacgtccagccgcattcgggcagccaggccaatcaggcggtg
tttctggcgctccttacgcccggtgatacgatcctcggtctggatttgaaggccggcgga
cacctgacccatggtgctccggtcaacatgtccggccgctggttcaatgttgtcagctat
ggcgtcgatccggagactcatcgcatcgacatggatcaggtggccgcgcttgcgcaccaa
caccggcccaagctcctgattgccggcggctcggcctatccccgcgtcatggactttgcg
cgcttccgccagatcgctgatgatgttggggcggtcctgctcgtcgacatggcgcatttt
gcggggctcgtggctggcggcgtctatccgtcgccggttccctttgccgatgtcgtcacc
tcgaccacgcataagacgctgcgcgggcctcgcggcggcttcgttctgaccaatgatgcc
gagatcgcgaagaagatcaattccgcgacgttccccggccttcagggcggaccgctcatg
catgtcatcgccgcgaaggcggtggcattcggcgaagcgctgcaaccgtcattcaagact
tatacgcaagctgtggtcgagaattgtcgtgtgctggcgcaggctctttccgatggcggt
ctgaagatcacttccggcggcacggattgccatctggccgtcgtcgatctgcgtcccttc
ggcgcgaccggcaatgtcgctgagaaggctttggagtcggtgggcatcacgctcaacaag
aatgcgatcccgaacgatccggaaaagcccatggtgacgtccggcatccgcgtcgggacg
gccgcaggcacgtctcgcggcttcggggtggacgaatatcgtgagatcgccgcgctcatt
ctcgatacgctccatgccgtccgcgccgggacgctcgatgcggatcggcaagggatcaac
gcgcgcgtgcgccagctcgtcgcgcgctttccgctgccttactga
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