KEGG   Sphingobium amiense: SAMIE_2000700
Entry
SAMIE_2000700     CDS       T06684                                 
Name
(GenBank) type IV secretion system protein TraC
  KO
K12063  conjugal transfer ATP-binding protein TraC
Organism
sami  Sphingobium amiense
Brite
KEGG Orthology (KO) [BR:sami00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sami02044]
    SAMIE_2000700
Secretion system [BR:sami02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   SAMIE_2000700
SSDB
Motif
Pfam: DUF5934 TraC_F_IV P-loop_TraG AAA_10 DUF87 T4SS-DNA_transf FtsK_SpoIIIE TrwB_AAD_bind CbiA Fer4_NifH AAA_22 AAA_16 TraG-D_C nSTAND3 MeaB Mg_chelatase Viral_helicase1 RNA_helicase
Other DBs
NCBI-ProteinID: BBE00184
UniProt: A0A494W6I2
LinkDB
Position
pSAMIE_2:complement(84873..87467)
AA seq 864 aa
MAKGGFFDSMLSGLFGDAARPDDDRPALGVPMLAHWLPYRSYDPKTGIFYNSASRGFVIE
AAPMVGADERTAEIITQFLSEGIPAPGCIQFHQWMSPRVGEALSKWYLPRYAARGVYERM
AKHRVDFLSDGVWQSLSKDAPFCLRHHRVAISYSTPESSSVSDDDIVSVMEGLVSALASV
GVTTRRMDPVALIAWIDDITSPTTAAGEDVVSYNPFDPIADQAIRRDIELRVEPDRMLLR
TERFRPTGKVHEGAPEIGEIYPDVFDVRSFSVRNLPNRWAPWDMAKLVGDMFTDKLRMPC
PVATNLCVEYPDTQASSNKASFKFMRTTSLADSKSARFLPQLRDQSQEWRFVNDEIRQGR
KLVRVFFSVTSFSPKGRGDANERVLKSVYRAAGWDLLDDRYLQVMGLLCAMPMTMANGLS
RDLERMKRMRTLLTTTAANLAPLQGEYLGGHVPHLLMVGRRGQPFFWSPFENAAGNHNVA
VFGKSGSGKSVALQELCASLCGAGAKVVVIDDGRSFEHSAKLQGGAFVEFTMSSGFCLNP
FSMIDEAQAAEDEDYLLDCMAMLKAIVNQMSRHIDRLNDTERGLIDGAVNTVWEAHGRRG
SIDLVIEALDATGNALAHDLSIAMRPFSAAGTYGRFFQGEVSFELKAQLTVFELSDLSAR
EELRSVVLTAIMFMSQQVMRKVDRAIPKALLLDEAWQLLRGGAMADFIETYARTCRKYGA
SLVTATQSLNDYYKSAGSIAALENSDWFVILQQKPETIADFKKHDRFEMDDYTDALLRSL
KRNGFEYSDIMIKGPETLAVGRLVLDPYSATLFSSSPQTFARIEALIGEGLSMDEAIERI
AFPDNPEKWAANAESDPDVAIAAE
NT seq 2595 nt   +upstreamnt  +downstreamnt
atggcgaaaggcggctttttcgacagcatgctctcggggctcttcggcgatgcggcgcgt
cccgatgatgaccggcccgcgctcggcgttcccatgctggcgcactggctgccctatcgc
agctacgatcccaagacggggatcttctacaacagcgcctcgcgcggtttcgtgatcgag
gccgctccaatggtgggcgctgacgagcgcaccgcggagatcatcacgcagttcctgtcc
gaaggcattcccgcgccgggctgcatccagttccatcagtggatgagcccgcgcgtgggg
gaggcgctgagcaaatggtatctgccgcgctacgccgcacgcggcgtctacgaacggatg
gccaagcaccgggtcgatttcctcagcgacggcgtatggcagtcgctctcgaaggacgcg
cccttttgcctgcgccatcaccgcgtggcgatctcctattcgacgcccgagagttcgtcg
gtgtccgatgacgacatcgtctcggtcatggagggcctcgtctccgcgctggcttcggtg
ggggtcaccacccggcgcatggatccggtcgcgctgatcgcctggatcgacgacatcacc
tcaccgaccacggctgccggcgaggacgtcgtcagctacaatcccttcgatcccatcgcc
gaccaggccattcgccgcgacatcgagctccgggtcgaacccgaccggatgctgctgcgc
accgagcggttccgaccgaccggcaaggtccacgaaggggccccggagatcggcgaaatc
tatcccgatgtcttcgacgtgcgctccttctcggtgcgcaacctgcccaatcgctgggcg
ccctgggacatggcgaagctggtgggcgacatgttcaccgacaagctgcgcatgccgtgc
ccggtcgcgacgaacctgtgcgttgaatatccggacacccaagcctcgtcgaacaaggcg
agtttcaagttcatgcggacgacgagtctcgccgattccaagtccgcgcgtttcctgccg
caactgcgcgaccagagccaggagtggcgcttcgtcaacgacgagatccggcagggccgc
aagctcgtgcgggtgttcttttcggtcacgtccttctcgcccaaggggcgcggcgacgcc
aacgaacgcgttctcaaatctgtctaccgagcagcgggctgggacctgctcgacgaccgc
tacctgcaggtgatgggcctgctctgcgccatgcccatgacgatggccaacggcctgtcg
cgcgatctcgagcggatgaagcgcatgcgcacgctgcttaccaccaccgccgccaatctc
gcgccgctgcagggcgaatatctgggcggccatgtgccgcatctcctgatggtgggacgg
cgcggccagcctttcttctggtcacccttcgaaaacgcggcgggcaaccataatgtcgcg
gtcttcggcaaatcgggttcgggcaagtcggtggccttgcaggagctgtgcgcctcgctg
tgcggcgctggcgcgaaggtggtcgtgatcgacgacggccgatccttcgagcattcggcc
aaattgcagggcggcgccttcgtcgagttcaccatgagctctggcttctgcctcaatccc
ttctcgatgatcgacgaggcccaggcggcggaggacgaggactatctgctcgactgcatg
gcgatgcttaaggccatcgtgaaccagatgtcgcgccacatcgaccgtctcaacgatacc
gagcgcggcctcatcgatggcgcggtcaacacggtttgggaggcgcacggccgaagagga
tcgatcgaccttgtgatcgaggcgctcgatgcaaccggcaacgcgctcgcgcacgatctc
agtattgctatgcgccccttctcggcggcgggcacctacggccggttcttccagggggaa
gtcagcttcgaactgaaggcgcagctcaccgtcttcgagctctcggatctctcggcgcgc
gaagaactgcgcagcgtggtcctcaccgccatcatgttcatgtcgcagcaggtgatgcgc
aaggtcgatcgcgcaatccccaaggcactgctgctggatgaagcctggcagctgctgcgc
ggcggggccatggccgacttcatcgagacctatgcgcgcacctgccgcaaatatggcgcc
tcgctcgtcaccgccacgcagtcgctcaacgactattataagtcggcggggtcaatcgca
gcgctggagaacagcgactggttcgtcattctgcagcagaagccggaaacgatagccgat
ttcaagaagcatgatcgcttcgagatggacgattataccgatgcgctgctgcgctccttg
aagcgcaacggcttcgaatattcggacatcatgatcaagggacccgagacgctggcggtt
ggtcgcctggttctggatccctattcggccacattgttttcctcgagcccgcagaccttc
gcccggatcgaggcgctgatcggcgagggtctcagcatggacgaggcgatcgagcgcatc
gcctttcccgacaatcccgagaaatgggcggcgaatgcggagagtgatcccgacgtcgca
atcgctgcggagtag

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