Sphingobium amiense: SAMIE_3001170
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Entry
SAMIE_3001170 CDS
T06684
Name
(GenBank) PAS domain-containing sensor histidine kinase
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
sami
Sphingobium amiense
Pathway
sami02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMIE_3001170
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sami01001
]
SAMIE_3001170
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sami02022
]
SAMIE_3001170
Enzymes [BR:
sami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
SAMIE_3001170
Protein kinases [BR:
sami01001
]
Histidine kinases
LuxR family [OT]
SAMIE_3001170
Two-component system [BR:
sami02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
SAMIE_3001170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS
PAS_9
PAS_4
HisKA
PAS_8
HATPase_c_5
PAS_10
PAS_3
HATPase_c_2
TniB
Motif
Other DBs
NCBI-ProteinID:
BBE00411
UniProt:
A0A494WGX0
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All DBs
Position
pSAMIE_3:133590..135125
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AA seq
511 aa
AA seq
DB search
MVDTRRGPDEIASDVARLAPLFLRQAGGHVLTLLDPAGIVLSYNEEGERAECWPLDRVLG
QPHDLFYPPDEIAAGRPCADLAAALHEGTLEREAWRVCENGAEYLARLTISALFEGDAHR
GFACISRDVTDEAAVRASIETREQHLQSILATVPDAMIIIDETGAITSFSAAAQRLFGYS
ETELVGRNVSCLMPQPDRDRHDEYIAHYLQTGERRIIGLGRVVVGQRRDGSTFPMQLSVG
EAGEDGQRLFTGFIRDLTAKEQDELRLKELQAELVHVSRLSAMGTMASTLAHELNQPLAA
VALYLETIRDMLDERDDEPFVSLRSVMDDAAQETLRAGHIVRRLRDFVARGEVDKSLHEL
PQVIAEASQLALVDARERGIRSFFAVDPAATPVLVDRVQIQQVLVNLMRNAIEAMAACPV
RDLKVATRLRPDGLIEVTVEDTGPGIADEVREQLFTAFNSTKADGMGLGLSICRTIIEAH
GGRIWMERPDRGGARFHFTLIHARAEEEHGG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacacgaggcgcgggccggacgagattgccagcgacgtagcgcggcttgcgccg
ctgttcctgcgacaggctggcggccacgtcctgacgctgctcgatcctgccgggatcgtg
ctgagctataatgaagaaggcgagcgtgccgaatgctggcccctcgatcgcgtcctggga
cagccccatgacctgttctacccgcccgacgagattgcggccggccgcccgtgcgcagac
ctggcggccgcccttcacgaaggcacgctggagcgcgaagcgtggcgggtctgcgagaac
ggcgcggaatatctcgcgcgcctgacgatcagcgccctgttcgaaggcgacgcacatcga
ggctttgcctgcatcagtcgcgatgtcaccgacgaggcggcggtccgggcgtcaatcgag
acccgcgagcagcatctccagtcgatcctggcgaccgtccccgatgcgatgatcatcatc
gacgagaccggcgccatcacgtcgttcagcgcggccgcccaacgcctgttcggctattcg
gaaaccgagctcgtcggccgcaacgtctcctgcctgatgccccagcccgatcgcgaccgg
cacgacgaatatatcgcgcattatctccagaccggcgagcgccggatcatcggcctcggc
cgcgtcgtggtcggccagcgccgcgacggctcgaccttcccgatgcagctgtcggttggc
gaggccggtgaagacgggcagcggttgttcaccggcttcatccgggatctcaccgccaag
gagcaggatgagctcaggctcaaggaactgcaggcagagctggtccatgtctcccggctg
agcgcgatgggcacgatggcctcgaccctcgcgcatgagctcaaccagccgcttgccgcg
gtcgcgctctatctcgagacgatccgcgacatgctcgacgagcgggacgacgaacccttc
gtgtcgctacggtcggtgatggatgatgcggcacaggaaacgctgcgggccggccatatc
gtccggcgccttcgcgatttcgtcgcccgcggcgaggtcgacaagagcctccacgagctg
ccgcaggtcatcgccgaggcgagccagctcgcgctggtcgacgcccgcgagcgcggcatc
cgcagcttctttgcagtcgatcccgccgcgacgccggtcctcgtcgacagggtgcagatc
cagcaggtgctggtcaacctgatgcgcaatgccatcgaggcgatggcggcgtgtccggtt
cgcgacctcaaggtggcgaccaggttgcgccctgacgggctgatcgaggtgaccgtggag
gataccggccccggcatcgccgacgaggtccgcgagcagctcttcacggcgttcaactcg
acaaaggccgacggcatgggcctcggcctttcgatctgccggaccatcatcgaagcgcat
gggggccgtatctggatggagcgccccgaccgcggcggcgcgcgctttcattttaccttg
atccatgcgcgggcggaggaggaacatgggggatag
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