Sandaracinus amylolyticus: DB32_004445
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Entry
DB32_004445 CDS
T03935
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
samy
Sandaracinus amylolyticus
Pathway
samy00300
Lysine biosynthesis
samy00550
Peptidoglycan biosynthesis
samy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
samy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DB32_004445
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DB32_004445
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
samy01011
]
DB32_004445
Enzymes [BR:
samy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
DB32_004445
Peptidoglycan biosynthesis and degradation proteins [BR:
samy01011
]
Precursor biosynthesis
Amino acid ligase
DB32_004445
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF7931
Motif
Other DBs
NCBI-ProteinID:
AKF07296
UniProt:
A0A0F6W4T9
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Position
5129582..5131087
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AA seq
501 aa
AA seq
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MTTLGELQRALGAELRGDASIVARGVRHDSRAVEAGDVFVAIAGQKARGSEFAAAALARG
AVAVITEQLVDVDAPQLRVSDARRALAIASHLVYGDPTASLACIGVTGTNGKTTTTWLID
EALTALAQRPALLGTVETRGPGFREQSAFTTPEADAIARFARRMVDASATHLVMEVSSHA
LALHRADGIRFEVAAFTNLTQDHLDFHGSMDAYFEAKARLFTELAPRHAVVRTDDPMGVE
LARRIPSRTQVHTLSRHRDASIRATNVAVDRDGARCDVSTPWGALRIESALLGAHNLDNL
LVAAGCLLAAGFAPSDVSRALGAAKGAPGRLERVEDPRDVAVLVDYAHSPDALANVLDAL
RPLTPGRLVCVFGCGGDRDRGKRPKMGEAAATRADLVVITSDNPRTEDPRAIVDMIVPGV
VALPAITPDALASSARGHVVEVDRRRAIDLALAAARPGDTVLIAGKGHEDYQIVGTTKID
FDDRVEARRAIARALEAGGAR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgctcggcgagctgcagcgcgcgctgggcgcggagctccgtggcgatgcgagc
atcgtcgcgcgcggcgtgcgccacgactcgcgcgcggtcgaggccggtgacgtgttcgtc
gcgatcgccgggcagaaggcgcgcggcagcgagttcgcggcggccgcgctcgcccgcggc
gcggtcgcggtgatcaccgagcagctcgtcgacgtcgacgcgccgcagctgcgcgtgtcc
gatgcgcgccgtgcgctcgcgatcgcgtcgcacctcgtgtacggcgatccgaccgcgtcg
ctcgcgtgcatcggcgtcaccggcacgaacggcaagaccacgacgacgtggctgatcgac
gaggcgctcaccgcgctcgcgcagcgccctgccctgctcggcacggtcgagacgcgcggc
ccgggcttccgcgagcagagcgcgttcaccacgcccgaggccgacgcgatcgcgcgcttc
gcgcgccgcatggtcgacgcgagcgcgacgcacctcgtgatggaggtctcgagccacgcg
ctcgcgctgcaccgcgccgacgggatccgcttcgaggtcgcggcgttcacgaacctcacc
caggatcacctcgacttccacggctcgatggacgcgtacttcgaggcgaaggcgcggctc
ttcaccgagctcgcgccgcgccacgcggtcgtgcgcaccgacgatccgatgggcgtcgag
ctcgcgcgccgcatcccgtcgcgcacgcaggtgcacacgctctcgcgtcatcgcgacgcg
tcgatccgcgcgacgaacgtcgccgtcgatcgcgacggagcgcgctgcgacgtgagcacg
ccgtggggcgcgctgcgcatcgagagcgcgctgctcggcgcgcacaacctcgacaacctg
ctggtcgcggcgggctgtctgctcgcggccggcttcgcgccgtccgatgtgtcgcgcgcg
ctcggcgccgcgaagggcgccccgggacgcctcgagcgcgtcgaggatccgcgcgacgtc
gcggtgctcgtcgattacgcgcactcgcccgacgcgctcgcgaacgtgctcgacgcgctc
cgcccgctcacgccgggacgcctcgtctgcgtgttcggctgcggtggcgatcgcgatcgc
ggcaagcgcccgaagatgggcgaggccgcggcgacgcgcgccgatctcgtcgtgatcacc
agcgacaacccgcgcaccgaagatccgcgcgcgatcgtcgacatgatcgtgcccggtgtc
gtcgcgctgcccgcgatcacgcccgacgcgctcgcgtcgtcggcgcgcggtcacgtggtc
gaggtcgatcgccgccgtgcgatcgatctcgcgctcgccgcggcgcgcccgggagacacc
gtgctcatcgcgggcaagggccacgaggactaccagatcgtcggcaccaccaagatcgac
ttcgacgatcgcgtcgaggcgcgtcgcgccatcgcgcgcgcgctcgaggcgggaggcgcg
cgctga
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