Sandaracinobacteroides saxicola: H3309_01965
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Entry
H3309_01965 CDS
T06739
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sand
Sandaracinobacteroides saxicola
Pathway
sand01501
beta-Lactam resistance
sand01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sand00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H3309_01965
01503 Cationic antimicrobial peptide (CAMP) resistance
H3309_01965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sand03036
]
H3309_01965
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sand02000
]
H3309_01965
01504 Antimicrobial resistance genes [BR:
sand01504
]
H3309_01965
Chromosome and associated proteins [BR:
sand03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
H3309_01965
Transporters [BR:
sand02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H3309_01965
Antimicrobial resistance genes [BR:
sand01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H3309_01965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RND-MFP_C
BSH_CzcB
YknX_C
BSH_RND
BSH_CusB
HH_MFP_RND
Beta-barrel_RND_2
Biotin_lipoyl
CzcB_C
HH_EMRA
HH_YBHG
BSH_Fcp1
DUF3040
INV_N
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
QMW23298
UniProt:
A0A7G5IIV6
LinkDB
All DBs
Position
394246..395421
Genome browser
AA seq
391 aa
AA seq
DB search
MNMQLSPLDPSMADQLRSPDDSDAARRSRRRRILLYAAAALVVAAIIAFYALRGGKPEPA
PAPTRAKVTVMVPGMTAVRDQVTASGSIAARRDMPVGVAGEGGQIVAIRAEAGSRVAKGQ
VLAEIDARVLRAQLAQLQAGVVQARADARLAQAELDRASALVTPGFISKADIDRRTATRD
SANARVTVAVAQVRESEARLARLSIRAPEAGIVLQRMAEVGQIVSPGSGMLFRVAAGGIL
EMRARVAEQDLVNLKAGMPATVTPVGSRLGYSGRIWLVEPAIDTETRQGVVRIALNYDPA
LKVGSFAKASIIAVETQRPVLPQSAVQADDRGSFVYVVDANNKVERRAITVGTVNDQGVS
IAAGLNGRERVVVSAGAFLRPGETITPVLNR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcagctctccccactcgaccccagcatggccgaccaactccggtcgcccgat
gacagtgacgcggcgcgccggtcgcgccgccggcgtatccttctctatgctgccgccgcg
ctggtggtggcggcgatcattgctttctatgccctgcggggcggcaagcccgagccggcg
ccggctccgacccgggccaaggtgaccgtgatggtgcccgggatgaccgcggtgcgcgat
caggtgacagcaagcggcagcatcgccgcgcggcgcgacatgccggtgggtgtggcgggc
gagggcggccagatcgtggcgatccgggccgaggccggatcacgcgtggcgaagggtcag
gtgctggcggaaatcgatgcccgggtcctgcgggcgcaactggcgcagttgcaggccggc
gtggtacaggcgcgtgccgatgcgcggctggcgcaggcggaactcgaccgggccagtgca
ctggtgacacccggtttcatcagtaaagcggacatcgaccggcggacggcaacccgcgat
tcggccaatgcccgggtaacggtggcggtggcgcaggttcgcgaaagcgaggcgcggctg
gcgcggctgtcgatccgcgcgccggaggccggcatcgtgttgcagcgcatggcggaagtg
ggccagatcgtgtcgccgggcagcggcatgctgttccgcgtggcggcgggtggcatcctg
gagatgcgcgcgcgggtggcggagcaggatctggtgaacctgaaggccggcatgccggcg
acggtgacgccggtcgggtcgcgcttgggctatagtggccgcatctggctggtggaaccg
gcgatcgacaccgagacgcggcagggggtggtgcggatcgcgctgaactatgatccggcg
ctgaaggtcgggtccttcgccaaggccagcatcatcgccgtggaaacgcagcgcccggtg
ctgccgcagtcggcggtgcaggcggacgaccgcggcagctttgtctatgtggtggacgcc
aacaacaaggtggaacggcgcgccatcacggtgggcacggtgaacgaccagggcgtcagc
atcgcggccgggctgaacgggcgcgaacgggtggtggtgagcgcgggcgccttcctgcgg
ccgggcgagaccatcacgcccgtcctgaaccgctag
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