Sandaracinobacteroides saxicola: H3309_13655
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Entry
H3309_13655 CDS
T06739
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sand
Sandaracinobacteroides saxicola
Pathway
sand00300
Lysine biosynthesis
sand00550
Peptidoglycan biosynthesis
sand01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sand00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H3309_13655
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H3309_13655
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sand01011
]
H3309_13655
Enzymes [BR:
sand01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
H3309_13655
Peptidoglycan biosynthesis and degradation proteins [BR:
sand01011
]
Precursor biosynthesis
Amino acid ligase
H3309_13655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QMW22380
UniProt:
A0A7G5IG88
LinkDB
All DBs
Position
complement(2711546..2712991)
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AA seq
481 aa
AA seq
DB search
MKLSALLGHATATDEVVTGFAIDNRKVAPGTIFGAFQGATVNGEDYIPAAVAAGAIAVVA
RPQALVEGALHIGSDNPRATFADLAARFFAPFPATCVAPTGTNGKTSTVELTRQLWYLVG
ERAASVGTLGITTADGSLKDGTGGLTTPDVVSFLANVAGLAREGITHLAFEASSHGLAQY
RTQGLPVAAAAFTNLTRDHLDYHGTMEAYFQAKLRLFTEVLADNGAAVVWRDDQAEGADY
NRRICEAVTARGLRLLTVGPDGETLRLVKRTPTLLGQTLAVEADGKSHSITLPLIGAYQA
ANALCAAGLVMTTGGDTAKTLAALSRVTGVRGRLERAVITASGAPVYVDYAHTPDALRAA
IAALRPHTANRLILAFGAGGDRDTGKRPEMGAIAVAEADVAIVTDDNPRGEDPAAIRAMI
LTAAPGAREIGDRRAAITAAVRMAGPGDVVLIAGKGHEQGQIVAGRTLPFDDVSVAREAA
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtccgcactgctcggccatgccaccgccacggacgaggtcgtcaccggcttc
gccatcgacaatcgcaaggtcgcccccggcaccatcttcggcgcgttccagggcgccacc
gtcaacggggaggattatatccccgccgcggtcgccgccggcgccatcgccgtagtcgcc
cggccgcaggcgttggtggaaggcgcgcttcacatcggcagcgacaatccccgcgccacc
tttgccgacctcgccgcccgtttcttcgcgcctttccccgccacctgcgtcgcccccacc
ggcaccaacggcaagacctcgaccgtcgaactcacccgccagctctggtatctcgtcggc
gaacgcgcggcgtcggtcggcacgctcggcatcaccaccgcggacggcagcctgaaggac
ggcaccggcggactgaccacgccggacgtcgtcagctttcttgccaatgtcgccggcctc
gcccgcgaaggcatcacccatctcgccttcgaggcctccagccatggcctcgcccaatac
cgcacccaggggctgccggtcgccgccgctgccttcaccaacctgacgcgtgaccatctc
gactatcacggcacgatggaggcctatttccaggccaagctgcggctgttcaccgaagtg
ctggcggacaatggcgccgcggtcgtctggcgcgacgaccaggccgaaggcgcggactac
aaccgccgcatctgcgaggcggtcacggcgcggggcctgcgcctgctcaccgttggcccc
gacggggaaaccctgcgcctcgtcaagcgcacccccaccctgctcggccagacgctggcc
gtcgaggcggacggcaagagccacagcatcaccctgccgctgatcggcgcctatcaggcg
gccaacgccctctgcgccgccggccttgtcatgacgacaggcggcgacaccgcgaaaacg
cttgccgcgctttcccgcgtcaccggcgtccgcggccggctggagcgggcggtcatcacc
gcttccggcgcccccgtttatgtcgattatgcccacacgccggacgcgctgagggccgcc
atcgccgcgctgcgcccgcacaccgccaaccgcctgatcctggctttcggcgccggcggc
gaccgcgacaccggcaaacgcccggaaatgggcgcgatcgcggttgcggaggccgacgtc
gccatcgtcaccgacgacaacccccgcggcgaagaccccgccgccatccgcgccatgatt
ctcaccgccgcccccggcgcgcgcgagattggcgaccgccgcgccgccatcaccgccgcc
gtgcggatggccggtcccggcgatgtcgtcctgatcgccggcaagggccatgaacagggc
cagatcgtcgccggccgcacgctccccttcgacgacgtcagcgtcgcaagggaggccgcg
caatga
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