Streptococcus anginosus C1051: SAIN_0885
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Entry
SAIN_0885 CDS
T02828
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sang
Streptococcus anginosus C1051
Pathway
sang03030
DNA replication
sang03410
Base excision repair
sang03420
Nucleotide excision repair
sang03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAIN_0885 (ligA)
03410 Base excision repair
SAIN_0885 (ligA)
03420 Nucleotide excision repair
SAIN_0885 (ligA)
03430 Mismatch repair
SAIN_0885 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sang03032
]
SAIN_0885 (ligA)
03400 DNA repair and recombination proteins [BR:
sang03400
]
SAIN_0885 (ligA)
Enzymes [BR:
sang01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
SAIN_0885 (ligA)
DNA replication proteins [BR:
sang03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SAIN_0885 (ligA)
DNA repair and recombination proteins [BR:
sang03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
SAIN_0885 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAIN_0885 (ligA)
MMR (mismatch excision repair)
DNA ligase
SAIN_0885 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAIN_0885 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
Ribosomal_L33
RTT107_BRCT_5
Motif
Other DBs
NCBI-ProteinID:
AGU81629
LinkDB
All DBs
Position
921543..923501
Genome browser
AA seq
652 aa
AA seq
DB search
MKDRMLELVKLLNQYAHEYYTTDNPSVSDSEYDKLYHELLDLEKQYPEFVQPDSPTHRVG
GKVLEGFEKYQHQYPLYSLQDAFSREELDVFDARIRKDFPDVSYLCELKIDGLSVSLMYE
KGILVAGATRGDGSVGENITENLKRVKDIPLKLPSEVDMTVRGECYMPRSSFDAVNQLRQ
ENGEPEFANPRNAAAGTLRQLDTAIVAKRNLATFLYQEASPTSATSQEAVLNQLSKNGFS
VNERHILAHSMDEVWQFIGQIAQERDQLPYDIDGVVIKVNDLAVQEELGFTVKAPKWAIA
YKFPAEEKEAHLLSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRKG
DTVIVYKAGDIIPAVLQVVESKRQSEEKLEIPKNCPSCNSELIHFEDEVALRCINPRCPA
QIKEGLIHFASRDAMNITGLGPAVVEKLFDQQLVNDVAGIYRLTVEDLLQLENFKEKSAN
KLYTAIQTSKENSAEKLLFGLGIRHVGSKASQILLEHFHDLEQLAKAKREEIAALDSLGM
VIAESLSSYFAQEGTHILLSELKEAGLNFTYLGEKVAADAALSGLTVVLTGKLERLNRSE
AKKKLESLGAKVTSSVSKKTSLVVAGADAGSKLTKAQELGIDIRDEIWLESL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacagaatgttagaactggtgaagttgctcaatcagtatgctcatgaatattat
acgactgataatccaagcgtatcggacagtgaatatgataagctgtatcatgaattatta
gatttagaaaagcagtatccagagttcgttcagcctgatagcccaactcatcgtgtggga
ggtaaggttttagaaggttttgaaaaataccaacaccagtatccgctctatagtttgcag
gatgctttttcacgtgaagagttagatgtatttgatgcacggattcggaaagattttcca
gatgttagctatctatgtgaactaaaaattgacggcctctctgtttctctcatgtatgaa
aaggggattttagttgcaggagcgactcgcggagacggttctgtcggggaaaatatcaca
gaaaatctgaaaagagtgaaagatattcctttaaagttgccaagcgaagttgatatgact
gttcgtggtgaatgttatatgccacgtagctcttttgatgcggtaaatcagctacgtcag
gaaaacggagaaccagaatttgctaatccgagaaatgcagcggcaggaacattgcgtcag
ttggatacggcgattgttgccaagcgaaatcttgcaacctttctctatcaagaagccagt
ccgacaagtgcgacgagccaagaagctgttttaaatcagttatctaaaaatggattcagt
gtgaatgagcggcatattttggcacattcgatggatgaagtgtggcagtttattggacaa
atcgctcaagaacgcgaccagttaccgtatgatattgacggtgttgtaatcaaggtaaat
gatttggcggtacaagaagagcttggttttaccgtaaaagcacctaaatgggcgattgct
tacaaatttccagccgaggaaaaagaagcgcaccttttatcagttgactggacggttggg
cggactggagttgttacgccgaccgccaacttgacgcctgtgcaattagcggggacaacg
gtcagccgagccactttgcacaatgtggattacattgctgaaaaggacattcgcaaaggc
gatacggtcatcgtttacaaagcaggcgacatcattccagctgttttgcaagtggttgaa
agtaagcgccaatcagaagagaaattggagattccaaagaattgtccaagttgcaacagc
gagttgattcactttgaagatgaggttgctttacgctgtatcaatccacgttgtcctgca
caaatcaaagaaggcttgattcattttgctagtcgcgatgccatgaatatcacaggtctt
ggtcctgctgttgtagaaaagttatttgaccagcagttggtaaatgatgtggctggcatt
taccgcttgactgtcgaagatttgctgcaattggaaaattttaaggaaaaatcagctaat
aagttgtatactgctattcagacttctaaggaaaactctgccgagaaattattatttggc
ttgggcattcgccatgttggaagtaaagccagtcagattttgctagagcattttcatgat
ttggagcaattagcaaaagcaaaaagagaagaaattgctgcgctggatagtctaggaatg
gtgattgctgagagtctttccagctatttcgcacaagaaggaactcatattttattgtcg
gaattaaaagaagcggggttaaatttcacctaccttggcgaaaaagtggcagcagatgca
gcgctttctggattgaccgttgttttaacaggaaaattggaacgtctcaatcgttcagag
gcgaaaaagaaattagaaagtttaggtgcaaaggtgacgagctcggtctctaagaaaaca
agtctagtcgttgccggagcagatgcaggaagtaaattaacaaaagctcaagagttagga
attgacattcgtgatgaaatttggcttgagagtttatag
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