Sinocyclocheilus anshuiensis: 107665554
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Entry
107665554 CDS
T04917
Name
(RefSeq) protocadherin-15-like
KO
K16500
protocadherin-15
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
107665554
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sanh03037
]
107665554
04515 Cell adhesion molecules [BR:
sanh04515
]
107665554
Cilium and associated proteins [BR:
sanh03037
]
Primary cilia and associated proteins
USH complex and associated proteins
107665554
Cell adhesion molecules [BR:
sanh04515
]
Cadherins
Protocadherins
107665554
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Ig_Cad99C_N
Cadherin_2
CDH23_a-b
Motif
Other DBs
NCBI-GeneID:
107665554
NCBI-ProteinID:
XP_016311963
LinkDB
All DBs
Position
Unknown
AA seq
1620 aa
AA seq
DB search
MRRRWWRSDCLVLAIGLFVIITQILAQNTEDWHYEECKLSRSGPPATIVTIDEESPNGTV
LVENMQINGRAQDPDRTISLTLLDNYDYWVILDPALQRLYLNSTGRVLDRDPPSYITTIV
VQVQCTNELVGTVILHEVRIVVRDRNDNTPRFQQPRYYVSVNELTPVGTTIFTGFSGNNG
ATDIDDGPNGQIEYAIQYNPNDPMSNRTVRVSGTLSGNIVLAERLNYEERTRYLIIVQAN
DRAPYPGTRRTATTTLTLDVSDGDDLGPMFLPCVLVNNTQDCNPITYRVAIPELTDPSKL
NPLNVTPPIRSIDQDRNIQPPSDRPGIMYFILVGQPATYLELFSLNRSTAELRLLKPVDR
ELYQRFNLVIKAEQDNGHPLPAYADLQIEILDENNQAPYFQRSSYQGFISESASVGTTIS
GSSNLTAPLGIIALDNDIEETKDPQLKITLNDYTSIFSITSTGITRYLTLLKPVDREIQT
NYTLTLVASDGVQQSRPLTVDILVIDANDNTPTFGQVSYSVEIFTNMLPGETVLQLTAQD
ADAGLNGLITYAILAGDQDDFIINNRTGRITLAPGVTLTVGRSYALTVRASDNAPDTERR
SSITTVYIEVLPPNNQSPPRFPLQTYNLEISEAMRIGAILLNLQATDRELDPITYQIQSG
DPQQVFNLSRTIGLLLLANPLDRETIDQYRLIVTASDGHPGGISTATVSIVITDVNDNDP
SFDLTLLRNLTVREEEANVFVGQVRAEDADLVSNVTYRIKTEAAQQLFAVNRLTGAVSVL
QVLDFEDLPAGNSTYTFEVEALDHGGVLPPGTATVIIRITDVNDFSPVFRQALYKGLVAP
NAEKGTVITTVLAEDQDPPGMPASKVRYRVDQDLSPYSGSIFDVETDTGRVITKVNLNEQ
PNAVFRLVVIAYDDGEPVKTNRTTVEITVLQPSRIPIFTEEEYRFSPVSESAPVGTPVGM
ILAAAVNTTVFYSIVSGNEGGEFMVNNRTGIIYTNKLLDYESVTSYVLRVQADSLAIILA
SLRAPSKTNTAKVFIDVQDENDHPPVFTRSLYIGGVTEDTKTFTTVLKVVATDIDTGNYS
KMAYRLIIPPTPEGQDSFVIEPYTGVIKSAIMFRNMRRSYFKFEVIATDNYGEGLSGRAD
VVVSVVNALDMQVVVSNVPPTVVEENKEQLISILERYVQDQIPGAKVIVESIGPRRHGEG
YELEDYTKSDLQVYAIDPLTNRAISRQELFKFLDGKILDINKEFQPYLGEGGRILEIRSP
DIVASVKKAAQAVGYTEGALLALAIIIILCCIPAILIVMVTYKQFKERQAECAKTARIQM
ALPAGKSTGGGAPTNLYEELGDGGIRRGFGREQQQLLRPSLLRPEALSMESGIDPGQDYY
NQDYYSYDQGYDPYPPYGSRRRLITPMYDEYGEAIMEDEGYYYGGPEAGKKKRIKLVLDR
EHDTTSTGEDSGQEVQRNRIPNISSHSNINGSVYLAQNGTIIRTRRPPYPNNLKLCSPTR
LGKQFKKLDKLGVTHEEHLPLNGTEDNGPTISTTTAHSYVTDHNLNSKECSVMGPNSIGP
KSNIDKARLELDKGCCEQESSVDNGEIKESVESPCEQTLSDEEELWMGPWNNLHIPMTKL
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggcgctggtggcgatcggactgtctggtgttggcgattggcttgtttgttatc
atcacccaaatcttggctcaaaacactgaggactggcactatgaggagtgtaagttgtca
cggtcgggtccacctgccacaatcgtcaccattgatgaggaaagtccaaatggtaccgtt
cttgtggaaaacatgcagatcaacggtcgggctcaggatccagatagaaccatctccttg
acgctgctggacaactatgattactgggttatccttgaccctgcactgcagagactgtat
ctcaacagcaccggacgagtgttggaccgagacccgcccagttacatcaccaccatcgtg
gttcaggttcagtgcaccaatgagctggtgggaacagttattctgcacgaagtacggata
gtggtgagggacagaaatgacaacacgcctcgtttccagcagcctcgttactatgtatca
gttaatgagctcactcctgtcggtaccaccatcttcactggcttctcaggaaacaatgga
gccacggacatcgatgacggaccaaacggacagatcgaatacgccattcagtacaaccca
aatgacccgatgtcaaacaggaccgtgcgtgtttctgggacgctgtctggtaatattgtt
ttggcagagcggctgaactatgaggagagaactcgctatctaattatagtccaggccaat
gaccgggctccgtatccgggaactcgtcgcacagcaaccactactctaactctggatgtc
tcggatggagatgatctgggtcctatgttcctcccgtgtgttctggtcaacaacacacag
gactgtaaccccatcacataccgtgtggctattcctgagctcactgacccgagcaaactg
aaccctctgaatgtgacacctcccattcgatccatcgaccaggacagaaacatccagcca
ccctcagacagaccgggaatcatgtacttcatactggttggtcaacctgctacgtaccta
gaattattttcgctcaacaggagcacagctgagctgcggctgctgaagcctgtggacaga
gagctgtaccagcgcttcaatctcgttattaaggccgagcaggataacggtcaccctctt
cctgcatacgctgacctgcagattgaaattctggatgagaacaaccaggcgccatatttc
cagcgttcctcgtaccagggcttcatcagtgagtctgcctcagttggcaccaccatctca
gggagctccaacctcacggccccgctgggcatcatcgcactggacaatgacatagaagag
acaaaagatcctcagttgaagatcactctgaatgactacacctccatcttctccatcaca
tctaccggcatcacacgctaccttactctactgaaaccagtggaccgagagatacagacc
aactacaccttaacgctggtggcatctgatggcgttcaacagagcagacccttgacggtg
gacatcctggtcatcgatgcgaatgacaacacacccactttcggtcaggtgtcctacagt
gtggagatcttcactaacatgctgcccggagagactgtcctgcagctgacggctcaggac
gctgacgctggtttaaacggcctcatcacatacgccatcctggctggagatcaagatgat
ttcatcatcaacaaccgcacaggacgaatcacgttagcaccaggggtcacactgaccgtc
ggccgttcctacgcactgaccgtgagagcgtcagacaacgctcctgacacagagaggagg
agctccataactacagtctacatagaggttctgccacctaacaatcagagtccaccacga
ttccccctgcagacctacaacctggagatcagcgaggccatgaggataggagccatactg
ctgaatctgcaggctacagaccgtgagctggatcctatcacctaccagatacaaagcggt
gacccgcagcaggtcttcaacctttcacgaactataggtcttctgctgctggccaatcct
ctggacagagagactattgaccagtatcgcctcatcgtcacggcatctgacggccaccca
ggagggatttccacggccactgtcagcattgtcatcacagacgttaatgacaacgatccc
agcttcgacctcactctactcagaaacctgaccgtgagggaggaagaggccaatgtattc
gtgggtcaagtcagggcggaggatgccgatctcgtctctaacgtgacctacagaataaaa
acagaagcggctcagcagctcttcgccgtgaaccgtctgaccggcgccgtatcagtcctg
caggtgttagactttgaggacttgccagcaggcaacagcacctacacgtttgaagtggag
gcgttagatcacggaggagtccttcctcctggaacggccacagtcatcattagaatcacg
gatgtgaatgacttctccccggtcttcagacaggcactctataaagggctggtggctcca
aatgcagagaaagggactgtcatcacaactgtgcttgcagaagatcaggaccctccaggt
atgcctgccagtaaagtgcgctacagagtggatcaggatctgtctccgtacagcggaagt
atctttgatgtggagacggacacaggacgagttatcaccaaagtcaacctgaacgagcag
cccaatgccgtcttcaggctggtggtgattgcctatgacgatggagagccggtgaagacg
aacagaactacagtggaaatcactgtgcttcagccctccaggattcccatcttcaccgag
gaagagtacaggtttagtccggtgagtgagagcgctcctgtcgggacgcctgtgggaatg
attctggccgcagccgtcaacaccactgtcttttactccatagtgagcggaaatgaagga
ggtgagttcatggtcaataaccgcactgggatcatctacacaaataaacttctggactac
gagagcgtgaccagttatgtgctccgcgtgcaggccgactccctcgctatcatcctcgcc
agtctacgggctccctccaaaacgaacacggcgaaggtatttatcgacgtgcaggatgag
aatgatcatcctccggtcttcacaaggtctctttatatcggaggagtgactgaagacact
aagaccttcaccacagtactgaaagttgtggctacagatatcgacacgggaaactacagt
aagatggcctacagactgatcatcccccccacacccgaggggcaggacagtttcgtcatt
gagccgtacactggcgtcatcaagagtgccatcatgttcagaaacatgcgccggtcctac
ttcaagtttgaggtcatcgccacagacaactatggggagggattgagcggcagggctgat
gtggtggtgtccgttgtcaatgccttggacatgcaggttgtggtctctaatgtgccgccc
actgtggtggaggagaataaagagcagctgattagtattttggagcgctacgtgcaagat
cagatccctggtgctaaagtgatagtggaatcgattggccctcggcggcatggagaaggt
tatgaacttgaggactacaccaaatcagacctgcaggtgtacgccatcgatcctctcacc
aacagagccatctccagacaagagctcttcaagtttctggacggcaagattctggacatc
aataaagagttccagccgtacctgggcgagggcgggcgaattctggagatccgttctcct
gacatcgtggcgagtgtgaagaaggctgcgcaggcggtgggctacacagagggggctctg
ctggcgctggccatcatcatcattctgtgctgcatccctgctattctcatcgtcatggtg
acgtacaaacaattcaaagagaggcaggccgagtgtgccaaaaccgcccgtatccagatg
gctcttcctgctggaaaatcgacaggaggtggcgctccgaccaatctctacgaggagctg
ggagacggcggcatcaggcgtggctttggcagagagcagcagcagctgttgagaccctct
ctgctccggcctgaggctctctccatggaatctggtatcgaccctggacaggattactat
aaccaagactactatagctatgatcaagggtatgatccctatccaccctacggcagccgc
aggaggctgattacacctatgtatgatgagtatggagaggccatcatggaagatgaagga
tattactatggtggaccagaggctggcaaaaagaagcgaattaaactggtgttggaccga
gagcatgacacgacttcaacaggagaagacagtggacaggaggtccagcgcaatcgcata
cccaacatcagcagccacagtaacatcaacggatcggtataccttgcccaaaacggtacc
atcatccgaacacgaaggcccccttaccccaacaacttaaaactgtgctcaccaacacga
ttaggtaaacagtttaaaaaactggacaagctaggtgtcacacatgaagagcatttacct
ttaaatggaacagaagacaatgggcctactatcagcaccaccactgcccattcctatgtt
actgatcacaaccttaactccaaagagtgcagtgtaatgggccctaacagcatagggccc
aaatccaacatcgataaagcccgtttggagctggataaggggtgctgtgagcaggagtcc
tcagtggacaatggggagattaaagagtcggtagagtctccatgtgagcaaacattgtct
gatgaagaggagctctggatgggtccctggaacaacttacacataccaatgacaaaactc
tga
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integrated database retrieval system