Sinocyclocheilus anshuiensis: 107671781 Help Entry 107671781         CDS       T04917                                  Name (RefSeq) thrombospondin-1-like isoform X1   KO K16857   thrombospondin 1 Organism sanh  Sinocyclocheilus anshuiensis Pathway sanh04115   p53 signaling pathway sanh04145   Phagosome sanh04148   Efferocytosis sanh04350   TGF-beta signaling pathway sanh04510   Focal adhesion sanh04512   ECM-receptor interaction sanh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sanh00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     107671781   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     107671781  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     107671781    04148 Efferocytosis     107671781   09143 Cell growth and death    04115 p53 signaling pathway     107671781   09144 Cellular community - eukaryotes    04510 Focal adhesion     107671781   09142 Cell motility    04820 Cytoskeleton in muscle cells     107671781  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sanh04131]     107671781   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sanh00536]     107671781 Membrane trafficking [BR:sanh04131]  Endocytosis   Phagocytosis    Opsonins     107671781 Glycosaminoglycan binding proteins [BR:sanh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    107671781 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 TSP1_ADAMTS Laminin_G_3 cEGF TSP1_CCN EGF Zn_ribbon_NUD Laminin_G_2 Motif Other DBs NCBI-GeneID:  107671781 NCBI-ProteinID:  XP_016320235 UniProt:  A0A671M0T8 LinkDB All DBs Position Unknown AA seq 1171 aa AA seqDB search MKSTAIFLLLMLWSCESARVAESRDDNSVYDLFELVQVPRKNHGVTLVKGDDPYSPAYKI LNPDLIPPVPESTFRDLIDSIHAERGFLLLLNFKQFKHTRGSLLTVEKKDGSGPIFEIIS NGKANTLDIVFSTESKQQVVSIEEADLAVGHWKNITLLVQEDRVQFYVGCEEVNTAELDA SIQTILTQETPGVASLRIGKGAVKDRFMGVLQNMRFVFGTTLEAILRNKGCQNSIMTDII TLDNPINGSRPAIRTDYTGHKTKDLQMICGFSCEDLAAMFKELKGLGVVVQELSNELRKV TDEKNMLMSRMDIHAGVCLHNGIVHKNKEEWTVDDCTECTCQNSATVCRKISCPLIPCAN ATVPDGECCPRCGTPSDSAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQMEGKDCQGEGR QTERCEKSPCPINGGWGPWSPWDTCSATCGGGVQNRKRLCNNPVPMYDGKDCVGDAKASQ ICNKQACPIDGCLSNPCFEGAQCTSFPDGSWKCGKCPTGYTGNGINCKDINECKEVPDAC FEFNGVHRCENTVPGYNCLPCPSRYTGPQPFGRGVEDAASKKQVCTPRNPCLDGSHDCNK NARCNYLGHFSDPMYRCECKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCP NLPNSGQEDYDKDGVGDACDNDDDDDGIPDDRDNCPLIFNPRQYDYDRDDVGDRCDNCAY NSNPDQTDTDNNGEGDACAVDIDGDGILNENDNCPYLYNIDQKDTDLDGVGDQCDNCPLE HNPDQVDSDSDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDSKGDACDYDDD NDGIPDDKDNCRLVPNKDQLDSDGDGRGDACKDDFDQDNVLDIYDVCPENFDISETDFRK FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQITQTYWSSTPTKAQGYSGLSIKVVNSTTGPGEHLRNA LWHTGDTPGQVRTLWHDPKNVGWKDFTAYRWHLTHRPRTGHIRVVMYEGKKIMADSGRIY DKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaagtcaactgcaatctttttgctactgatgctttggagctgcgagagcgcgagagtc gcagaaagtcgagacgacaacagtgtttacgatctgtttgagctcgtccaagtgccgagg aaaaaccacggggtgactctggtgaaaggcgacgatccgtacagccccgcctacaagatc ctgaaccccgacctgattcccccggttcccgagagcaccttcagggacctgatcgattcc atccatgcggagagaggatttctgcttctgctcaacttcaaacagttcaaacacacgaga ggaagccttctgaccgtggagaagaaagatggctctggacccatcttcgaaataatttcc aatgggaaagccaatactctggacattgttttttccactgaaagcaagcaacaggtcgtg tccatcgaggaagcagatttggctgtgggacattggaaaaacatcacgcttttagtgcag gaggacagggttcagttctatgtgggatgtgaggaggtgaatacagcagagctcgatgct tctatccagactatcctcactcaggagaccccaggtgtggcgagcctgaggatcggcaag ggcgcagtgaaggacaggttcatgggggtgttgcaaaacatgcgctttgtgtttggtacc acactggaggcaattctgaggaataaaggatgccaaaactcaattatgactgatatcatc acccttgacaatcccataaatggatccagacctgcaatcaggactgattacactggccac aaaacaaaagatctgcagatgatttgtggcttttcatgtgaggacctggctgccatgttc aaggaactgaaaggtcttggtgtggtggtgcaagagctgtccaatgaactccgcaaagtg acagacgagaaaaacatgctcatgagtcgcatggacattcatgctggtgtctgtcttcac aatggaattgtgcacaaaaacaaggaggaatggacagtggacgattgcacagagtgcact tgccagaactctgcaacggtgtgccgcaagatttcatgccccctaatcccatgtgcaaac gccacagtgcctgatggggagtgctgccctcgatgtggaaccccgagcgattccgctgag gatggctggtccccctggtctgaatggacccattgttctgtgtcctgtggaaggggcatt cagcagcgcggccgctcctgcgaccgcatcaataacaactgcgagggcacgtcggtgcag acgagagactgctaccttcaggagtgtgacaagcgctttaagcaggatggcagctggagt cactggtcaccctggtcttcctgctcagtcacctgtggtgctggcgttatcacgcgcatc cgtctctgcaactccccaacacctcaaatggaaggcaaagattgccagggtgaaggtcgg caaactgaaaggtgtgagaaatcaccatgtccgatcaatggtggctggggaccatggtca ccctgggatacttgctctgccacctgtggcggtggagtccaaaaccgtaaacgtctttgc aataatccagtacccatgtatgacggcaaagactgtgtgggagacgcaaaggctagccag atttgcaacaaacaagcctgtccaattgatggatgcctttcaaatccttgctttgaagga gcccagtgtacaagcttcccagatggctcttggaaatgtggaaaatgccccacaggatac actggcaatggaatcaactgcaaggatatcaatgagtgcaaggaggtccctgatgcctgc tttgaatttaatggagtccacaggtgtgagaacacagtgccaggctacaactgcctgcct tgcccctcacgctacaccggcccacagccgtttggtcgaggagtggaggacgctgcttcc aagaaacaggtctgcacgcctcgtaatccctgcctcgatggaagccacgactgcaataag aacgctcgctgcaactacctgggccatttctcagaccctatgtaccgctgtgagtgcaaa cctggctatgctggaaatggacacatctgtggagaggacactgatcttgatggctggcct aatgctgatcttgtgtgtgtcgagaacgcaacctaccactgcaagaaggacaactgcccc aatcttcctaactctgggcaagaggactatgacaaggatggagttggtgatgcttgtgat aatgatgatgacgacgatggcattcctgatgacagggacaactgcccactcatcttcaac ccaagacagtatgactacgatcgcgatgacgtgggagaccgctgcgacaactgtgcgtac aacagcaacccagaccagaccgacactgacaacaatggtgaaggtgacgcctgtgctgtg gacattgatggagatggtattttgaatgagaacgacaactgcccatatctgtacaacatt gaccagaaagacaccgatctcgatggagttggtgaccagtgtgacaactgccctctggaa cacaacccagaccaggtcgactccgattctgaccgtgttggagacaaatgtgacagcaac caggatatcgatgaggatggtcaccaaaacaacctggacaactgcccgtacatccccaat gctaaccaggctgatcatgacaaggatagtaaaggagatgcttgcgactatgatgatgat aatgacggcatccctgatgacaaagacaactgcagattggttcccaataaagatcaactg gattctgatggcgatggacgtggtgacgcctgtaaagatgactttgaccaagacaatgtc ctggatatctatgatgtctgtcctgagaactttgacatcagtgaaacggacttccggaaa ttccagatggttcctctggatcccaagggcacttctcagatcgaccccaactgggtggtt cgtcaccaaggaaaagaactggttcagacagtcaactgcgaccctggcattgctgttggt tttgatgagttcaattcagtcgacttcagtggaacgttcttcatcaacactgagagggat gatgactacgccggcttcgtttttggataccagtccagctctcgcttctacgtggtcatg tggaagcagatcacacagacctactggtccagcacacctaccaaggcacagggttactcg gggctgtcaatcaaagtggttaactccaccacagggccaggcgagcatctgagaaacgcc ctgtggcacactggagacactccaggacaggtgcgcacactgtggcatgacccaaagaat gtgggatggaaggacttcactgcttacagatggcatttgactcatagaccaagaactgga cacataagagtggtcatgtatgaaggcaaaaagatcatggcagattctggaagaatttat gacaaaacttatgcaggcggaagactaggtctctttgttttctcacaagagatggtgtac ttctcagacctcaaatatgaatgcagagatgcgtaa

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