Sinocyclocheilus anshuiensis: 107678760 Help Entry 107678760         CDS       T04917                                  Name (RefSeq) thrombospondin-1-like isoform X1   KO K16857   thrombospondin 1 Organism sanh  Sinocyclocheilus anshuiensis Pathway sanh04115   p53 signaling pathway sanh04145   Phagosome sanh04148   Efferocytosis sanh04350   TGF-beta signaling pathway sanh04510   Focal adhesion sanh04512   ECM-receptor interaction sanh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sanh00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     107678760   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     107678760  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     107678760    04148 Efferocytosis     107678760   09143 Cell growth and death    04115 p53 signaling pathway     107678760   09144 Cellular community - eukaryotes    04510 Focal adhesion     107678760   09142 Cell motility    04820 Cytoskeleton in muscle cells     107678760  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sanh04131]     107678760   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sanh00536]     107678760 Membrane trafficking [BR:sanh04131]  Endocytosis   Phagocytosis    Opsonins     107678760 Glycosaminoglycan binding proteins [BR:sanh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    107678760 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C EGF_3 TSP1_ADAMTS cEGF EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  107678760 NCBI-ProteinID:  XP_016329631 LinkDB All DBs Position Unknown AA seq 1152 aa AA seqDB search MPDDDTVFDLFELTHVHKKHHGVSLEKGPDPNSPAYKILNPSLIPSEPELSFRDLIYSIQ SERGCIFTANLKQAKRTRGSLVSVERTDGTGSVFEIISNGKANTVDLVYWTASGQHVVSI EDVDVANGHWKNITVFVQEDRAQVHVGCEEINTQELDAPIQQILNQESADISSLRIAKGA AKSDRFMGVLQNVRFVFGTTLDAILRNKGCESPTFITDVMTLENPENGSSPAIRTDYTGH KSKDLQDICGFPCDDLSSMFKELKGLGMVVKQLSNELRQVTADNNLIMTQIKIHEGVCLH NGIVYRDKDEWTVDSCTHCTCQNSATVCREISCPLMPCANATLPDGECCPRCETPNDAGV DGWSPWSEWTHCSVTCGRGIQQRGRSCDRINSNCDGTSVQTRDCYTQECDKRFKQDGGWS HWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGKDCEGDGRQTEPCQKDPCPVNGGWGPWS SWDSCSVTCGGGLQRRHHLCNSPAPKYGGKECMGDSKGTRLCNAQSCPVDGCLSNPCFAG TKCTSFPDGSWKCGECPVGYTGDGVHCQDIDECEEVPDACFVLNGVHQCVNTEPGYNCLP CPPRYSGQQPFGRGTEQAIANKQVCIPRNPCEDGSHDCNKNANCIYLGIFSDIMYRCECK PGYAGNGYICGEDSDLDGWPNTDLHCVENATYHCKKDNCPDLPNSGQEDYDKDGTGDACD NDDDNDGIPDEGDNCPFIFNPRQYDHDRDQVGDRCDNCPYDSNPEQTDTDNNGEGDTCAI DIDGDGILNEKDNCPYVYNTDQRDSDADGVGDHCDNCPLEHNPDQIDSDSDNIGDKCDNN QDIDEDGHQNNLDNCPYIPNANQVDHDKDGKGDACDHDDDNDGVPDDKDNCRLAFNPDQL DSDGDGRGDVCKDDFDVDNVPDIYDVCPENFGISETDFRRFQLVPLDPTGTSQIDPNWVV RHQGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINTDRDDDYAGFVFGYQSSSRFYVVM WKQITQTYWSHTPTKAQGYSGLSIKVVNSTTGPGEHLRNALWHTGDTEGQVRTLWHDPKN IGWKDYTAYRWQLIHRPKTGHIRVIMYEGKKVLADSGSINDKTYAGGRLGLFVFSQEMVY FSDLKYKCRDAS NT seq 3459 nt NT seq  +upstreamnt  +downstreamnt atgccagatgatgacaccgtgttcgacctgttcgagctcactcatgttcataagaagcat catggggtgagtttagagaagggacccgatccaaacagccccgcgtacaagatcctgaac ccgagcctgatcccctcagagcccgagctctccttcagggacctgatctactccattcag agcgagagaggctgcatcttcaccgccaaccttaagcaagccaagcgcaccagaggcagc ctggtctccgtggagaggacagacggcaccggatccgtctttgagatcatctccaacggg aaagccaacaccgtggatctggtgtactggaccgcgagcgggcagcatgtggtgtccatt gaggacgtggacgtggcgaacggacactggaagaacatcacggtgtttgtgcaggaggat cgagctcaggtccatgtgggctgcgaggagatcaacactcaagaactcgatgctccgatc cagcagatcctgaatcaggagagcgcggacatctcgagcctgaggatcgccaaaggagcc gccaaatccgatcgcttcatgggagttctccagaacgtgcggtttgtttttggaacgacg ctggacgcgattttacgcaataaaggatgcgagagcccaaccttcatcactgatgtcatg accttggaaaaccccgagaacggatccagccccgccatccgcactgattacaccggacac aagtctaaagatctgcaggacatctgtggattcccatgcgacgatctgtcgagcatgttt aaggagctcaagggactcggcatggtggtgaagcagttgtcaaacgagctccgccaagtg acagcagacaacaacttaatcatgactcagattaaaatccacgaaggggtttgtctgcac aacggcatcgtttacagagacaaagacgagtggacggtggacagctgcacccactgcacg tgtcagaactccgccactgtgtgccgtgaaatctcctgtcctctcatgccctgtgccaac gctactctcccagacggtgaatgctgcccacgctgtgaaacaccgaacgatgcgggtgtg gacggctggtcgccctggtccgaatggacacactgttcggtgacctgtggaagaggcatt cagcagcgcggacgctcttgcgaccgaatcaatagcaactgcgacggcacgtctgtccag acgagagactgttacacgcaagaatgcgataaacgcttcaagcaggatggtggctggagc cactggtctccctggtcttcttgctcagtgacgtgtggcgagggcgtcatcactcgcatc cggttgtgcaactcccctacgcctcagatgggcgggaaagactgcgagggagacggtcgt cagaccgagccgtgccagaaggacccgtgccccgtgaatggaggttggggaccctggtca tcatgggactcttgctccgtcacgtgcggtggaggacttcagcgcagacaccatctgtgt aacagccccgctcccaaatacggtggaaaagaatgtatgggtgactccaaaggcacccgt ttgtgcaatgcccagtcgtgtccagttgacggatgcctgtctaacccatgctttgctggc accaaatgcaccagcttccccgatggctcctggaaatgcggcgagtgtccggttggatac actggggatggagtccactgtcaagacattgatgagtgtgaagaagttccagatgcctgt ttcgtgctcaatggagtccatcagtgtgtgaacacagaaccaggctacaactgcctgccc tgccctccacgctactctggacagcagcccttcggcaggggaacggagcaggccattgcc aacaaacaggtctgcatacctagaaacccatgcgaggacggcagccatgactgcaataag aatgccaactgcatctacctgggcatcttctctgacatcatgtaccgctgcgaatgtaaa ccaggctatgctggaaatggttacatctgtggagaggactctgaccttgacggctggcca aacacggacctccactgtgtggaaaacgccacctaccactgcaagaaggacaactgtcct gaccttcccaactctggtcaagaagactatgacaaagatggaactggagatgcttgtgac aatgatgatgacaatgatgggatccctgatgaaggggacaattgcccgttcatctttaac ccaagacagtacgaccatgaccgcgatcaagttggtgaccgatgtgataattgcccatat gacagtaatccagaacagactgacaccgacaacaatggcgagggtgatacctgtgccatt gacatcgatggtgatggcatcctgaatgagaaggacaactgtccatatgtgtacaacact gaccagagagacagtgacgcagacggagtcggtgaccactgtgacaactgcccactggag cacaaccctgaccagatcgactctgactctgacaacattggagacaaatgtgacaacaac caggacatcgatgaggatggacatcagaacaaccttgacaactgtccctacatccccaac gccaaccaggtcgaccacgacaaggacggcaaaggagacgcctgcgatcacgacgacgac aatgatggcgtgcctgatgacaaagacaactgccgacttgccttcaacccagatcaactg gattcggacggagacgggcgaggtgacgtttgcaaggacgactttgacgtcgataacgtg ccggatatttacgacgtttgcccggagaactttggcatcagtgaaacagacttccgtagg ttccaattggttcctctcgatcccacaggaacttcccaaatcgaccccaactgggtcgtc cgtcaccagggcaaagaacttctgcagaccgtcaactgtgatcctggcatcgctgttggt tatgatgagttcaatgccgtggactttagcggcacattcttcatcaacacagaccgtgac gacgactacgccggctttgtgtttggctaccaatccagctcacgtttctacgtggtgatg tggaaacagatcacacagacctactggtctcatacacccactaaagcacaggggtactca ggactgtccattaaagtagtaaactcgacaacaggaccgggcgaacacctcaggaacgct ttgtggcacactggagacaccgagggacaggtgcgtaccctgtggcatgatcccaagaac attggctggaaggattacaccgcctacagatggcaactaatccacagacccaaaaccgga cacatcagagttatcatgtatgaaggcaaaaaagtcttggctgattcaggaagcatcaat gacaagacatatgccggaggaagacttggcctctttgtcttctctcaagagatggtttac ttctcagacctcaaatacaaatgccgagatgcatcataa

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