Sinocyclocheilus anshuiensis: 107687421
Help
Entry
107687421 CDS
T04917
Symbol
agrn
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04512
ECM-receptor interaction
sanh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107687421 (agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107687421 (agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sanh00535
]
107687421 (agrn)
Proteoglycans [BR:
sanh00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107687421 (agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
EGF_laminin
SEA
EGF
Kazal_CFAI
Laminin_G_3
hEGF
GAPES2
Motif
Other DBs
NCBI-GeneID:
107687421
NCBI-ProteinID:
XP_016340244
LinkDB
All DBs
Position
Unknown
AA seq
2042 aa
AA seq
DB search
MGSFCRKAFYWHVWSFAVVFVLLSTRCHGSCSEKELEKREEEANIVLTGTVEEILNMDPV
HNTYSCKVRVWRYLKGKIMVNGEVLLDGGNKVMIGGFGDPHICDNQVATGDTRIFFVNLP
PHFMWPSHKNELMLNSSLMRITLRNLEEVEHCVEDKPVHFTPAPPPDGCRGKLCGFGAVC
ERDPTDPSKGECVCKKIVCTSVVAPVCGSDSSTYSNECVLEKAQCNTQRRIKVMRRGPCA
LKDPCSEVSCSFGSTCIQSSDGLSAKCMCPLSCENVPKYVVCGNDGLDYQSECELNMKAC
ATQKNIRVHHQGRCDPCSDTLNSLSVACRVNPKTYKQFTFAQADSCPPDSTPICASDGHT
YDSECQMERIALQNNLELKKVSSGSCKEKGGCPNGCKFNAMCLLENGEFRCSCNPIQCDG
TYKPLCGKDGKTYPNDCERKLEECRTETGIPVKQQGPCDLNLESPCLKKTCEFGAVCVVK
NSEPVCECSDVCPQDQDPVCGSDGHTYSSSCQMKAMGCALQKQIQMQHKGPCADESCTNC
SFGAICDAQTGRCVCPKGCLETRQPVCGSDGMTYENECKLNVEACTKQLDLRVVAHGECK
TCGSTVCRWGARCVQNQCECQQCTGQPVKPVCGSDGTTYDNDCELRLASCKKQRKIEVTK
PGVCDEDCGSGGSGSGSETCEQDRCQRYGGSWDDDTEDDRCVCDFNCQTVPRSPVCGSDG
TTYTSECELKKARCEKQMDLLLQSQGPCPAIISAPPELIASQHCSETVYGCCQDSKTAAL
GVGLAGCPSVCQCNHYGSYGGTCDPSTGQCSCKPGVGGLKCDRCEPGFWNFRGIVTENMS
GCTPCNCDGVGSVRDDCEQMSGLCSCKPGVKGMKCNMCPDGSKMGANGCDKGPEAPKSCD
ELVCHFGASCVEVNGQAHCECPSPDCDEKNKTKVCGSDGVTYADRCQLRTIACRQDKEIT
VEHLGQCKESIELTAKPTPFPNTHRTPPPTAHVKITKQRHGHTTTTTTSSIPKELDSFLV
EALPPPKVVEAGKYSSSFTTHRPTTLNKPPRTSSPPLDSSPDFDESGSGEPSGDEEMVSG
MEESGEEPLGTTVATTTLPTAEERSSCDNTPFGCCPDGKTAAISSEGTNCPSTMRFSGLL
HLDKVEGQEVFYTPEMEDPKSELFGETARSIESALNELFHKSDVQKDFQSIRVKNLAPSN
SIIAFIEAHFDPDTRFSVEDIEGALLKQLKASKDTGIVVKKPEEDNIRITTYGLSAVPFF
TTTTTTVASVTTPTTTMLSPTSAFTTLRPTTTRRPFTSRRTTTASPATTTPSQTPTTTVS
LKNRLMVHANRLCDSQPCRHGGTCEEEGNDFTCICPAGRGGAVCEKVIKYFIPSFGGKSY
LAFRTMRAYHTVRIAMEFRASEMTGILLYNGQKGKKDFLSLALVEGHVELRFNTGSGTAS
VISKVLVRPGRWHQLVVVRNRRNAMLSVDNEPSVEGQSPPGTDGLNLDTDLFIGGVLEDM
IPDVKERTSVSTGLVGCIRMLDVNNFVYNLQENGDSILYGSGVGECGNNPCLPNPCKNGA
SCQVKEAEMFHCKCVNGFSGPTCADAHNPCDPNKCHPSSRCQVLPEGGYKCECPMGREGK
HCEKVSDKGGAFIPYFTGDSFLELKGLHLYGQDLRQKFSMTVVLLANDSKGMIFYNGQKT
DGKGDFISLSLNDGILEFRYDLGKGPAVIRSKEKIKLNEWNTVNLERASRKGEISINGKD
PVRGEAPKSRKNQHTDLNLKESLFVGGAPDFRKVARAAAIKGGFKGAIQKITLMGIPILK
ADNALHSSDVSMYPYHPCSKDVCENGGRCNPLLDSYECVCLHGFAGQHCQDAIFEKSAGD
TEAIAFDGHTFIEYHNGVTKSEKALLVNKFELSIRTESTHGLILWNGKGVERSDYIALAI
VDGRVQMTYDLGSKPVVLHSSVRVNTNRWIRIKASRALRDGSLQVGNEAAVTGSSPLAAT
QLDTDGALWLGGLEELSVARRLHKAYSTGFVGCVKDMIVDGVQLHLVEDALNSPKILHCS
AK
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atgggctctttttgcagaaaggcgttttattggcacgtttggtcatttgctgttgttttt
gtgcttttgagtacgcgttgtcatggaagttgttcagaaaaggagctggaaaaacgagaa
gaagaggcgaatatagttttaaccgggactgtagaggagatcttgaacatggatccagtg
cacaacacttattcctgcaaggtcagggtatggcgttacctaaaaggcaagatcatggtg
aatggagaggtgctgctggacggaggaaacaaggtgatgatcggcggtttcggagacccc
catatttgcgataatcaggtggccaccggagatacgcgcattttctttgtcaacctgcct
cctcacttcatgtggccgagccacaagaacgaactgatgctcaactcaagcctgatgagg
attactctccgcaacttggaggaggtggagcactgcgttgaagataaacctgttcacttc
acaccggctcctcctcctgatggttgcagaggaaagctgtgtggatttggagcggtgtgt
gagagagaccccactgacccctctaaaggagagtgtgtttgtaagaaaattgtatgtacg
tctgtggtggcgccggtgtgtggttctgactcctctacctactccaatgagtgtgtgctg
gagaaggcccagtgcaatacacagagacgcatcaaggtgatgcgcagaggcccctgtgca
ctgaaggacccatgcagcgaggtgtcctgtagctttggcagcacctgcatccagtcatcc
gacggtctgtccgccaagtgcatgtgtcctctgagttgtgagaacgtccccaagtacgtg
gtgtgcggcaatgacggcctggactaccaaagtgaatgtgagctcaacatgaaagcctgc
gccactcagaagaacatccgtgtgcatcaccaaggccgttgcgatccttgcagtgatact
ctgaacagcttgagtgtggcctgtcgggtgaacccaaagacctacaagcagtttaccttc
gcccaagccgattcctgcccacccgacagtacgcccatctgcgccagtgacggccacact
tacgatagcgagtgtcagatggagcggatagccctgcagaacaacctggagctcaagaag
gtttcttcaggcagctgcaaggagaaagggggctgcccgaacggttgtaagttcaacgcc
atgtgcttgctggaaaacggagagtttcggtgttcctgcaaccccatacaatgtgacggc
acatacaagcccctgtgcggaaaggacggaaagacataccccaacgactgtgagaggaaa
ctcgaagagtgtcggaccgaaacaggcatccctgtcaagcaacaagggccctgtgatctt
aacctggagagcccctgcctgaagaagacctgcgagtttggagccgtgtgtgtggttaag
aacagcgagcctgtgtgcgagtgctcagacgtgtgtccacaggaccaagaccctgtttgt
ggcagcgatgggcacacttacagcagctcatgtcaaatgaaagccatgggatgtgccctt
cagaaacagatacagatgcagcacaaaggaccatgtgcagatgagtcctgcaccaactgc
tcatttggcgcgatctgcgatgctcagactggccggtgtgtgtgccccaaagggtgtttg
gaaacacggcagcccgtgtgcggcagtgacggcatgacgtacgagaacgagtgcaagctg
aacgtggaagcctgcactaagcagctggatctcagagtggtggcccatggagaatgcaaa
acctgtggcagcactgtgtgtagatggggagcacggtgcgtgcagaaccagtgtgagtgt
cagcagtgcacgggtcagccggtgaaacccgtgtgtggcagcgacggcaccacctacgac
aacgactgtgagctgcggctggcctcctgcaagaaacagaggaagattgaggtgaccaaa
cctggcgtctgtgatgaagactgcggatcaggaggctcaggttcaggatctgaaacctgc
gagcaggatcgttgtcaacgatacggcggatcgtgggatgacgacacggaagatgaccgc
tgcgtgtgtgacttcaactgtcagacagtgccacgcagcccagtgtgtggctctgatggg
actacatacaccagcgagtgtgagctgaagaaggccaggtgtgagaagcaaatggacttg
ctgctccagagccaaggtccctgcccagctatcatatcagctcctccagagctcatcgcc
tcccagcactgtagcgaaactgtttatggatgttgccaagacagcaagaccgctgccctg
ggtgttggactagctgggtgtcctagtgtgtgtcagtgtaaccattacggctcatacgga
ggcacctgtgacccatccaccggccagtgttcctgtaaacccggcgtcggaggactcaag
tgtgaccgctgcgagcccggattctggaacttccgaggcatcgttacagaaaacatgagt
ggctgcacaccgtgtaactgtgatggagtgggttcggttcgtgacgattgtgagcagatg
tcagggctgtgctcatgtaagcctggagttaagggcatgaaatgcaacatgtgccctgac
ggcagcaagatgggagccaacggctgtgacaaaggacctgaggcacccaagtcctgtgat
gagcttgtgtgccactttggggcatcatgtgtagaggtgaatggacaggctcactgtgag
tgcccgtcaccagattgtgatgagaaaaacaagaccaaggtatgtggttctgatggggtc
acctatgcagaccgatgccagctgaggaccatcgcatgcagacaagataaggagatcact
gtggagcatttaggccagtgcaaagaatccattgagctgacggccaaacccacccccttc
ccaaacacccaccgcaccccccctcccaccgctcacgtcaagatcaccaaacagcgtcat
ggccacaccaccaccaccactacttcaagcattcccaaggaactggacagcttcttggtg
gaggcactgcctcctccgaaggtggtcgaggcaggaaagtactccagctctttcaccacc
caccgccccaccacactcaacaaaccaccccgcacctcatccccacccctggactccagc
cctgactttgatgaatcgggcagtggagagcccagtggggacgaagagatggtgagcgga
atggaggagagcggagaagagccacttggtacaacagtagctactactactcttcccaca
gctgaagaaaggtcatcctgtgacaacacacctttcggctgctgtcccgatgggaagacg
gccgccatcagctctgagggtacaaactgcccctccaccatgcgtttcagcggcttactg
cacctggataaggtagagggtcaggaggtcttctacacgcctgagatggaggaccccaag
tccgagttgtttggtgaaacggcccggagcatcgaaagcgctctgaatgaattgttccac
aagtcagatgtccagaaagacttccagagtatccgtgtgaagaatctggcccccagcaac
tccataatagcctttattgaggctcactttgacccagacacaaggttcagtgtggaggat
attgagggagctcttctcaaacagctcaaggcatctaaagacacaggtatcgttgtgaag
aaacctgaggaagacaacatccgcatcaccacctatggtctttcagctgttcctttcttc
acgaccacgacaaccaccgtggcatcagtcacaactcccaccaccacaatgctgtctccc
acttctgcatttaccacgctccgcccgaccaccaccagacgacccttcaccagccgcagg
accaccacagcctcaccagccaccaccactccatcccagacccccacgaccacagtctcg
ctcaagaacagattgatggtccacgccaacaggctgtgcgactcgcagccctgccgtcac
ggtggaacctgcgaggaggagggtaatgacttcacctgcatctgtcctgcaggaagagga
ggagccgtgtgcgagaaagttataaagtacttcatcccatcctttggtggtaagtcttac
ctggctttccgaaccatgagggcctaccacactgtgcgcattgccatggagttcagggct
tcggaaatgacagggatattgctgtacaatggccaaaaaggcaaaaaggacttcttgtct
ctggcactggttgaaggacatgtggagctcaggtttaacactggttctgggacggcttca
gtgatcagtaaggtcctggtaagaccgggtcgctggcatcagctcgtagtagtgcgtaac
aggcgtaatgccatgctgagcgtggacaatgagccgagcgttgaaggacagagtccccca
ggaacagatggactcaacctggacacagaccttttcatcggaggagtgcttgaagacatg
ataccagatgtaaaggagaggacgtcagtttcaacaggcctggtaggctgcatccgcatg
ctggacgtcaacaactttgtctataacctgcaagagaatggcgacagcattctatacggc
tcaggcgtgggcgagtgtggcaacaatccatgcctgccgaacccttgcaagaacggagcc
tcctgtcaggtcaaagaagccgagatgttccactgcaaatgtgtcaatggtttctctggt
ccaacctgcgctgacgcccacaacccttgcgaccccaataaatgtcacccatcatcgcgg
tgccaggtccttccggagggaggatacaaatgtgaatgtccaatgggacgtgaaggcaag
cactgtgaaaaagtgtcagacaagggaggcgctttcattccttactttactggagactct
ttcctggagctcaagggccttcatctctacggccaggatctgaggcaaaagttcagcatg
actgtggttctgttggccaatgactccaaaggcatgatcttctacaacggtcaaaagaca
gacggcaaaggagatttcatctctctctccttgaatgatggtatcctagagtttcgatat
gatctaggcaaagggccagctgtcattaggagtaaagaaaaaatcaagctgaacgaatgg
aacacagtgaatctggagagggccagcagaaaaggagagatcagcattaacggcaaagac
cccgtcagaggagaggcaccgaaatcacgcaagaatcagcacacggatcttaatctgaag
gagtcgctctttgtgggcggagccccagatttccgcaaagtagccagagctgctgcgatt
aaaggtggcttcaaaggggccattcagaagattactctgatgggaattccaatcctgaaa
gctgataacgcacttcactccagtgatgtgtccatgtatccctaccacccctgctccaaa
gatgtttgtgagaacggaggccgctgcaaccccctgttggacagctatgagtgcgtctgc
ctccacggattcgctggacagcactgccaggatgcaatattcgagaaatctgctggggac
accgaggccattgcatttgatggtcatacattcatcgaatatcacaacggagtcaccaag
agtgagaaggccctgctggtgaataaatttgaactgagcatcaggactgagtctactcat
ggtctgattttgtggaacgggaagggagtggagcgttccgactacatcgccctcgccatt
gtggacggccgtgtgcagatgacctatgacctcggctccaagcctgttgtgctgcactcc
tctgtacgggtcaacaccaaccgctggatacgaatcaaggccagcagagcgctcagagat
ggctcgctgcaggttggtaatgaggcagctgtcactgggtcatcacccttggctgccaca
cagctggacacagacggcgctctctggttgggtggtctggaggagctgtccgtagctcgc
cggttgcacaaggcttacagcacaggctttgtcggctgcgtgaaagacatgatagtcgac
ggggtgcaactacatctggttgaggacgccttaaacagtcccaaaatattacactgttct
gccaaatag
DBGET
integrated database retrieval system