Sinocyclocheilus anshuiensis: 107690313
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Entry
107690313 CDS
T04917
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107690313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sanh03041
]
107690313
Spliceosome [BR:
sanh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107690313
Complex C
U5 SnRNP specific factors
107690313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
107690313
NCBI-ProteinID:
XP_016344102
UniProt:
A0A671SCE1
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
METDLYDEFGNYIGPELDSDEDEVDADDREADEADEEEDDEDQAEVDEEDGGGMEVVLHE
DKKYYPTAEEVYGPEVETIIQEEDTQPLTEPIIKPVKMKRFTLMEQELPVTVYDMEFLAD
LMDSSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDSDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSVRLSDGIVLFIDAAEGVMLNTER
LIKHAVQEKLAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDESLIVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYMEFAKRLWGDIYFNPKTRKFTKKAP
NSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVQHIPSPQGGARAKIEHSYTGGLDSDLGETMSECDPDGPLMCHTTKM
YSTDDGVQFHAFGRVLSGTLQAGQPVKVLGENYSLEDEEDSQICTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYAIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggagacggatctttatgatgagtttggaaactatattggaccagagctggactctgat
gaagatgaagtagatgcagatgaccgggaggctgatgaggcggatgaggaggaggatgat
gaagaccaggctgaggttgacgaggaggatggtggcggtatggaggtggttctgcatgag
gataaaaagtattatcccacagctgaggaagtttatggtcctgaggtggagactatcatc
caagaagaagatacacaaccattgacagagcccatcataaaacctgtgaagatgaagcgg
tttactctgatggagcaagagcttcccgtcaccgtctatgacatggagttccttgctgat
ttgatggacagctcagaactgatcagaaatgtcaccttgtgtggacacttacaccatggc
aagacttgctttgtggactgcctcattgaacagacacatcctgaaatccgcaagagagat
gactctgatttacgatacacagatatcctcttcacagagcaagagaggggagttggcatc
aagagtacgcctgtaaccatggttctgcctgactcccggggcaaatcttacctttttaac
attatggacacgccaggtcatgtgaatttctctgatgaggtgacatcatcagtcagactg
tctgacggcattgtgcttttcatcgatgctgctgagggggtgatgctaaacactgagcga
ctgatcaagcatgcagtgcaggagaagttggccatcactatctgtattaataaagtggat
cgtctgatcgtggagctcaagctgccccctacagatgcctactacaaactgcgccacatt
gtggatgaggtcaacggcttgctgagcacatactccactgatgagtctctgattgtgtct
cccctgttggggaacgtgtgtttcgcttcctcacaatacagcatctgcttcactcttggc
tcctttgccaaaatctattcagacacctacggtgacatcaactacatggagtttgctaaa
agactgtggggagacatttacttcaaccctaaaacgaggaaattcacaaagaaagccccc
aacagcaactctcagcgcagctttgttgagttcgtactagagccgctgtacaagattctt
tcacaggtggtgggggatgtggatacgtctctgcctcgtgtgttggatgagctcggcatt
catctgactaaagaggaattaaagctcaacatcagacctctgctgcgccttgtctgtaac
cgcttttttggagagtttacaggctttgtggacatgtgtgtgcaacacataccatctcct
caggggggtgccagagccaagatagagcatagctacacaggtggactggactcagacctc
ggagagacaatgtctgagtgtgaccctgatggtccactgatgtgccacaccactaagatg
tacagcacagatgacggcgtgcagttccatgcgtttggtcgagtcctgagcggaaccctg
caggcgggccagccggtgaaggttctgggagagaactacagcctggaagatgaggaggac
tcacagatctgtactgttggacgcctttggatttctgtcgctaggtatcagattgaagtg
aatcgtgtccctgctggtaactgggtgttgatcgaagggtgcgaccagcctattgttaaa
acggccacaatcacagagccccgtggaaatgaagaggctcagatcttcaggccattgaag
tttaacacagcgtcagtgataaaaatcgctgtggagccggtcaatccctcagaactgccc
aagatgttggatggactcagaaaagtcaacaaaagttatccgtcacttacaacaaaggtg
gaggagtcaggagaacatgtgattcttggtacaggtgagctgtacctggactgtgtaatg
cacgacctgcggaagatgtactctgagatcgatatcaaggtggctgatccagtagtgacc
ttctgtgagactgtggtagagacgtcctccttgaagtgtttcgctgaaacgcccaataaa
aagaataagattaccatgattgctgagccgttggagaagggtctagccgaagacattgag
aacgaggtggtgcagatcacgtggaacagaaaaaagttgggagagtttttccagacgaag
tatgactgggatttgctagcagctcgttccatttgggcttttggacctgacacaaccggg
cccaacattttagtagacgacactttgccctctgaggtagataaagctcttcttggctca
gtgaaggacagcattgtacagggcttccagtggggcacacgcgagggtcctttgtgtgat
gaaccaatccgcaacgtgaagtttaagatcctggacgcagtgatcgcacaggagccgctg
cacagaggaggaggacaggtcatccctacagctcgcagagtcgtctactctgccttcctg
atggccacgcccaggctgatggagccctattactttgtggaggttcaggcccctgctgac
tgcgtttctgctgtgtacacggtgctggcacgcaggagaggtcatgtgactcaggatgcg
ccaatccctggctctcctctctacgccatcaaggctttcattcccgctattgactcgttt
ggctttgaaactgatctccgcacacacacgcagggccaggccttcgcgctcagtgtgttc
caccactggcagattgttcccggtgatcctttggataagagcattgtgattcgtcctcta
gagcctcagccggcccctcatctggccagagagtttatgatcaaaacccgcaggcgcaaa
ggtttgagcgaggacgtcagtatcagcaagttcttcgatgaccctatgttgttggagctg
gccaaacaagatgtggtgctcaattacccgatgtga
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