Sinocyclocheilus anshuiensis: 107703531
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Entry
107703531 CDS
T04917
Name
(RefSeq) short transient receptor potential channel 6-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107703531
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sanh04040
]
107703531
Ion channels [BR:
sanh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107703531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
RIN1
Sigma_reg_N
Motif
Other DBs
NCBI-GeneID:
107703531
NCBI-ProteinID:
XP_016361675
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MNQRRPVLEDRNPSKYHTIERRNRSKDNLLMNEDFGEDCFGSYGHYHGENLARQALPKSR
RQAVRGAAYMFNAHPNSLTPVEERFLDAAEYGNIPVVRRMLEEIPVLDVNCVDYMGQNAL
QLAVANEHLEVTELLLKKDNLSRIGDALLLAISKGYTRIVEAILSHKAFADSKRLTASPS
QAPMHDDFFAYDEDGTRFSHDVTPIILASHCHEYEIVHILLGKGARIEQPHDYFCTCDTC
NYHQKYDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELASLANIEKEFKNEY
RKLSMQCKDFVVGLLDLCRSTEEVEAILSGEDDEALEVPGRPSLIRLKLAIKYELKKFVA
HPNCQQQLLSIWYENLPGLRQQTTAIKFLVVLGVAIGLPFLAMVYWVAPCSKMGKIMRGP
FFKFVAHAASFTIFLGLLVMNTADRFDGTKLLPNMTIHDYQTQLFRMKTTPFTWMEMLII
SWVIGMIWAECKEIWSQGPREYLVEPWNLLDFGMLAIFVASFISRIMACWHARVAQRYVD
EHYTDLTNVTLPFEVGYFQLARIDWLPSDPQLVSEGLYAIAVVLSFSRIAYILPANESFG
PLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLYSYYRGAKQNEAFTTVEESFKTLFWA
IFGLSEVKSVVVNNGHKFIENIGYVLYGVYNVTVVIVLLNMLIAMINNSFQEIEDDADVE
WKFARAKLWFTYFEEGRTLPVPFNLVLSPKSVLGLVMGAKGLLLEIFNRHKAIMKGSELS
ELGQSKTCQDKSLPSSSRYQKIMKRLVKRYIIKAQNDEECDEVNEGELKEIKQDISSLRY
ELLEEKSHNMEELAKLVRTLEKNLSQDCLILKSH
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaggagacctgttctggaggatagaaatccatcaaagtatcacacgattgaa
aggagaaacagaagtaaagacaatctactaatgaacgaagactttggtgaggactgtttt
ggcagttatggacactaccatggtgagaacctggctcgacaggcgttacccaagagcaga
aggcaggcggtgcgaggggcagcctacatgttcaatgcccatcccaacagcctaacccct
gtagaggaacgtttccttgatgccgccgagtatggaaacatacctgtggtgcgccgaatg
cttgaggagatccctgtgctggatgttaactgtgtggactacatgggccagaatgcattg
cagttggcagtggcaaacgagcacttagaagtaacagagctcttgttgaagaaagacaac
ttgtcacgtattggggatgcacttttgttggccatcagcaaaggttacaccaggattgtc
gaggccattttgagccacaaagcttttgccgactccaagagacttacagcgagccctagt
caggctccaatgcatgatgacttttttgcgtacgatgaagatggcacgcgcttttctcat
gacgtcactccaatcattctagcatctcattgtcacgaatatgaaatcgtgcacattctt
ctgggtaagggtgctcgcattgagcagccacatgactacttttgtacctgcgacacctgc
aattaccatcaaaagtacgattctttctcccactcccgctcgcgtatcaatgcatacagg
ggactggccagtccagcgtacctctctctatccaatgaggatcctgtgttggcggccctt
gagctcagcaatgagctggcttccttggccaatattgaaaaagaatttaagaatgaatat
aggaaactttctatgcaatgcaaagactttgttgtgggacttctggacctttgtcggagc
acagaggaagtggaagccattctgagcggtgaagatgatgaggctttagaagtgcctgga
cgaccaagtctcattcgcttaaaactcgcaataaagtatgaactgaaaaagtttgtggcc
catcctaactgtcaacaacagctcttatcaatatggtacgaaaacctgcccggactcagg
cagcagaccaccgccattaagttcctagtggttttaggtgttgcaatcggacttcccttt
ctagcaatggtgtattgggtggcaccatgcagcaagatgggaaagatcatgcgtggccct
ttcttcaagtttgtagcacacgcggcctccttcactattttccttggccttttggtcatg
aacactgcagaccgctttgatgggacaaagctgcttccaaatatgaccattcatgactat
cagacgcagctgtttcgtatgaaaacgactccctttacgtggatggaaatgctcatcatt
tcctgggtcatagggatgatttgggcggagtgcaaggagatctggtcccaaggtccaaga
gaatatctggttgagccttggaatttgctagactttggaatgttggccatttttgtggca
tccttcatctcaaggataatggcttgctggcatgcacgcgtagcacaacgctatgttgat
gagcactacactgatttgaccaatgtcactttgccttttgaggtgggatacttccagttg
gctcggatcgactggctcccgtctgatcctcagttagtttctgagggcttgtacgccatt
gcagtggtcctgagcttttctcgaattgcgtacatcctgccagcaaatgagagctttgga
ccactgcagatatctttgggacgaactgtgaaggacatcttcaagttcatggttatcttc
attctagtctttctggccttcatgattggaatgttcaacctctactcatattatcggggc
gctaaacagaatgaagctttcacaactgtagaggaaagcttcaaaacattattttgggca
atatttggcctttctgaggtcaaatcagtagtcgtgaacaatggacacaagttcatcgag
aacattggctatgttctctatggagtttacaatgtcactgtggtcatcgtcctgctcaac
atgctcattgctatgattaacaattccttccaggagattgaggatgatgcagatgtggag
tggaagtttgcccgggccaagctctggttcacctactttgaggagggccggactcttcct
gtgccttttaacttggttctcagtcccaaatctgttctgggtctagttatgggggctaag
ggtcttttgctggagattttcaacagacacaaagccattatgaaggggtctgagctcagt
gagttgggacagagcaaaacttgccaggacaaatctcttcctagctccagtcgatatcag
aaaattatgaagcgtcttgttaagcgatacatcatcaaagcccaaaatgacgaagaatgt
gatgaagtcaatgaaggtgaactgaaggagattaagcaggacatttcaagccttcgctat
gagctgctggaggaaaagtcacacaacatggaggagctggcaaagctagtgaggacgctt
gaaaaaaatctctctcaggactgcttgatactaaagtctcattaa
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