Streptomyces anulatus: KZO11_26890
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Entry
KZO11_26890 CDS
T09280
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sanl
Streptomyces anulatus
Pathway
sanl03030
DNA replication
sanl03410
Base excision repair
sanl03420
Nucleotide excision repair
sanl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sanl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KZO11_26890 (ligA)
03410 Base excision repair
KZO11_26890 (ligA)
03420 Nucleotide excision repair
KZO11_26890 (ligA)
03430 Mismatch repair
KZO11_26890 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sanl03032
]
KZO11_26890 (ligA)
03400 DNA repair and recombination proteins [BR:
sanl03400
]
KZO11_26890 (ligA)
Enzymes [BR:
sanl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
KZO11_26890 (ligA)
DNA replication proteins [BR:
sanl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KZO11_26890 (ligA)
DNA repair and recombination proteins [BR:
sanl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
KZO11_26890 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KZO11_26890 (ligA)
MMR (mismatch excision repair)
DNA ligase
KZO11_26890 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KZO11_26890 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
Nlig-Ia
HHH
Zn_ribbon_TFIIB
zf-IS66
Motif
Other DBs
NCBI-ProteinID:
QYA96996
LinkDB
All DBs
Position
6080814..6083045
Genome browser
AA seq
743 aa
AA seq
DB search
MAGEERVEQESSVPADVREKHALLAEQIEEHRFRYYVKDQPVVSDGDFDRQLRSLEALEE
EHPALRTPDSPTQKVAGPYRTEFTSVEHRERMLSLDNAFDDEELAAWADRVAKDVGTPDH
HFLCELKVDGLAVNLTYEQGRLTRAATRGDGRTGEDITPNVRTIAEIPHRLKGENIPALV
EIRGEVFFPMEDFEELNARLVAADDKPFANPRNAAAGSLRQKDPKVTATRPLHMVVHGIG
AHEGLSIDRLSAAYELLHAWGLPTAQHNKVVDSLAGVREFIAYYGENRHSVEHEIDGVVV
KLDEIPLQGRLGSTSRAPRWAIAWKYAPEEVNTKLVNIRVGVGRTGRVTPYAQVEPVEVA
GSEVEFATLHNQNVVKAKGVLIGDTVVIRKAGEVIPEILGPVVDLRDGTEKAFEMPTHCP
ECGTELRPMKEADIDLRCPNARTCPAQLRERVFYLAGRKSLDIDHFGYVAAAALTRPLEP
AEPVLRDESDLFSLTVDQLLPIRAYVLDQDSGLPKRDPKTGEEKIATVFANQQGEPKKNA
VAMLEGIAAAKEAPLARVLTGLSIRHVGPVAAQELARQFRSIDRIDEASEEELAAADGVG
PTIAASVKQWFAEDWHREIVRKWREAGVRMADEGSDEDEGPRPLEGLTVVVTGTLTGHTR
DGAKEALQALGAKVAGSVSKKTAFVVVGDNPGSKYDKAMQLKVPVLDEDGFAILLEQGPE
RAKEAALPAPETTPGAAPESNGE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgaagagcgggtggagcaggagagttcggttccggcggacgtgcgggagaag
cacgcgctgctggccgagcagatcgaggagcaccgcttccgctactacgtgaaggaccag
ccggtcgtcagcgacggcgacttcgaccggcagctgcgctcgctggaggccctggaggag
gagcacccggcgctgcgcaccccggactccccgacccagaaggtcgccgggccctaccgc
acggagttcacctcggtcgagcaccgcgagcgcatgctctccctggacaacgccttcgac
gacgaggagctggccgcctgggcggaccgggtcgccaaggacgtcggtacgcccgaccac
cacttcctgtgcgagctcaaggtcgacggcctcgcggtcaacctcacctacgagcagggc
cgcctgacccgggcggcgacccgcggcgacggccgcaccggcgaggacatcacgcccaac
gtccggacgatcgccgagatcccgcaccgcctcaagggcgagaacatccccgccctcgtc
gagatccgcggcgaggtcttcttccccatggaggacttcgaggagctgaacgcccggctg
gtcgccgccgacgacaagcccttcgccaacccgcgcaacgcggcggccggatcactgcgc
cagaaggaccccaaggtcaccgccacccgcccgctgcacatggtggtgcacggcatcggc
gcccacgagggcctgagcatcgaccgcctctccgcggcctacgaactgctccacgcctgg
ggcctgcccaccgcccagcacaacaaggtcgtcgactccctcgccggcgtacgggagttc
atcgcgtactacggcgagaaccggcactccgtggagcacgagatcgacggcgtcgtcgtc
aagctcgacgagatcccgctccagggacgcctcggctccacctcgcgcgccccgcgctgg
gccatcgcctggaagtacgcccccgaagaggtcaacaccaagctggtcaacatccgcgtc
ggcgtcggacgcaccggccgcgtcaccccgtacgctcaggtcgagccggtcgaagtggcc
ggttccgaggtcgagttcgccaccctccacaaccagaacgtggtcaaggccaagggcgtc
ctcatcggcgacaccgtggtcatccgcaaggcgggcgaggtcatccccgagatcctcggg
cccgtcgtcgatctgcgcgacggcaccgagaaggccttcgagatgccgacccactgcccc
gagtgcgggacggaactgcggccgatgaaggaggccgacatcgacctccgctgccccaac
gcccgtacctgcccggcccagttgcgcgaacgcgttttctacctcgccgggcgcaagagt
ctggacatcgaccacttcggctatgtggccgccgccgccctgacccgtcccctggagccc
gccgagcccgtcctgcgcgacgagagcgatctgttctccctcaccgtcgaccaactgctg
ccgatccgggcgtacgtcctggaccaggacagcgggctgcccaagcgcgacccgaagacc
ggcgaggagaagatcgcgacggtcttcgccaaccagcagggcgagccgaagaagaacgcg
gtggccatgctggaaggcatcgccgccgccaaggaggccccgctcgcccgggtcctcacc
gggctctccatccggcacgtgggaccggtcgccgcccaggagctggcccgtcagttccgt
tccatcgaccggatcgacgaggcgagcgaggaggagctggccgccgccgacggggtgggg
ccgaccatcgccgcctcggtcaagcagtggttcgccgaggactggcaccgcgagatcgtg
cgcaagtggcgggaggccggggtgcggatggcggacgagggatccgacgaggacgagggc
ccccgccccctcgaaggactgaccgtcgtcgtcaccggcaccctcacgggtcacacccgc
gacggtgcgaaggaggcgctccaggctctgggcgcgaaggtcgccggatcggtgtcgaag
aagacggcgttcgtggtcgtcggcgacaaccccggctccaagtacgacaaggcgatgcag
ttgaaggtgcccgtgctggacgaggacggattcgcgatcctgctcgaacagggacccgaa
cgtgcgaaggaggcggctctgcccgccccggaaaccacgcccggggccgccccggagagc
aacggggagtaa
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