Streptomyces angustmyceticus: K7396_10900
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Entry
K7396_10900 CDS
T07927
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sanu
Streptomyces angustmyceticus
Pathway
sanu03030
DNA replication
sanu03410
Base excision repair
sanu03420
Nucleotide excision repair
sanu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sanu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K7396_10900 (ligA)
03410 Base excision repair
K7396_10900 (ligA)
03420 Nucleotide excision repair
K7396_10900 (ligA)
03430 Mismatch repair
K7396_10900 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sanu03032
]
K7396_10900 (ligA)
03400 DNA repair and recombination proteins [BR:
sanu03400
]
K7396_10900 (ligA)
Enzymes [BR:
sanu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
K7396_10900 (ligA)
DNA replication proteins [BR:
sanu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K7396_10900 (ligA)
DNA repair and recombination proteins [BR:
sanu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
K7396_10900 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K7396_10900 (ligA)
MMR (mismatch excision repair)
DNA ligase
K7396_10900 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K7396_10900 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
HHH
HMBD
Motif
Other DBs
NCBI-ProteinID:
UAL66979
LinkDB
All DBs
Position
complement(2457260..2459476)
Genome browser
AA seq
738 aa
AA seq
DB search
MAGEQHAAASEVPAAAREKHAQLAEQVEEHRFRYYVKDAPVVSDAEFDRLLRSLEALEDE
HPELRTPDSPTQKVAGAYATEFTEVEHRERMLSLDNAFDDEELAAWAERIAGELGGAPAS
AGYHFLCELKVDGLAVNLTYEQGRLTRAATRGDGRTGEDITPNVRTIAEIPHRLRGDRIP
DLVEVRGEVYFPMEKFLELNERLVAEGKPPFANPRNAAAGSLRQKDPKVTAGRPLHMVVH
GVGAREGLEIDRQSAAYDLLKAWGLPTAAHNRVVDSLEAVRAFIGHYGDAETRRTAVEHE
IDGVVVKLDEIRLQGRLGSTSRAPRWAIAWKYPPEEVNTKLVDIRVGVGRTGRVTPYAVV
EPVTVAGSEVEFATLHNQDVVKAKGVFIGDTVVIRKAGDVIPEILGPVVDLRDGSEREFV
MPAECPECGTALQPAKEGDIDLRCPNARACPAQIRERLFYLAGRKCLDIENFGYVAATAL
SQPLEPAEPPLKDEGDLFGLSIEQLLPIKSYVLDPDSGLPKRDPKTGEEKVVTFFANQKG
EPKKNALAMLENIQAAKQRPLARIITGLSIRHVGPVAAEALAREFRSIDRIRDADETELA
AVDGVGATIAASLKRWFAVDWHQQIIESWRAAGVRMEEEQTGEEGPRPLEGVTVVVTGTL
QSHTRDGAKEALQNLGAKVTGSVSKKTGFVVVGDNPGSKYDKAMQLKVPVLDDDGFAVLL
EQGPDAARAVAVTPPEEE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtggctggcgaacagcacgcagcggcatccgaggtgcccgcagcggcgcgggagaagcac
gcgcagctcgctgagcaggtcgaggagcatcgcttccggtactacgtgaaggacgccccg
gtcgtcagcgacgcggagttcgacaggctgctgcgctccctggaggcgctggaggacgag
caccccgagctgcgcacccccgattcgccgacccagaaggtcgccggggcgtacgccacg
gagttcaccgaggtggagcaccgcgagcggatgctctcgctcgacaacgccttcgacgac
gaggagttggcggcctgggccgagcggatcgccggcgagctgggcggcgccccggcgagc
gccggctaccacttcctgtgcgagctgaaggtggacggcctcgccgtcaacctcacctac
gagcagggccggctgacccgcgccgccacccgcggcgacggccgcacgggcgaggacatc
acccccaacgtccgcacgatcgccgagatcccgcaccgtctcaggggcgaccggattccg
gatctggtcgaggtgcgcggggaggtctacttcccgatggagaaattcctggagctcaac
gaacggctggtggccgagggcaagccgccgttcgccaacccccgtaacgccgcggccggt
tcgctgcgccagaaggaccccaaggtcacggccggccgcccgctgcacatggtcgtccac
ggcgtcggcgcccgtgagggcctggagatcgaccgccagtcggcggcctacgacctgctg
aaggcgtggggcctgccgacggccgcgcacaacagggtcgtcgactccctggaggcggtc
cgcgccttcatcggccactacggcgacgccgagacccgccgtacggccgtcgagcacgag
atcgacggcgtggtcgtcaagctggacgagatccggctgcaggggcggctgggctcgacc
tcgcgggcgccgcgctgggcgatcgcctggaagtacccgccggaggaggtcaacaccaag
ctcgtcgacatccgcgtcggcgtcggccgtacgggccgggtcacgccctacgccgtcgtg
gagccggtgacggtggccgggtccgaggtggagttcgccaccctgcacaaccaggacgtg
gtcaaggccaagggcgtgttcatcggggacaccgtcgtgatccgcaaggccggtgacgtc
atcccggagatcctcggcccggtcgtcgacctccgggacggcagcgagcgggagttcgtg
atgccggccgagtgccccgagtgcgggacggcgctgcagcccgccaaggagggcgacatc
gacctgcggtgccccaacgcccgcgcctgccccgcccagatccgcgagcggctgttctac
ctggccggccgcaagtgcctggacatcgagaacttcggctatgtcgcggcgacggcgctc
agccagccgctggagcccgcggagccgccgctgaaggacgagggcgatcttttcggcctc
tccatcgaacagctgctgcccatcaagtcgtacgtcctcgaccccgactccggtctgccc
aagcgcgatccgaagaccggcgaggagaaggtcgtcaccttcttcgccaaccagaagggc
gagcccaagaagaacgccctggccatgctggagaacatccaggcggccaagcagcgcccg
ctggcccggatcatcacgggcctgtcgatccggcacgtgggcccggtggcggccgaggcg
ctggcgcgggagttccgttcgatcgaccgcatccgggacgcggacgagacggagctggcc
gccgtcgacggcgtcggcgccaccatcgccgcctccctgaagcggtggttcgccgtggac
tggcaccagcagatcatcgagagctggcgggccgccggcgtccggatggaagaggagcaa
acgggtgaggagggcccgcgtcccctcgaaggcgtcaccgtcgtcgtaacgggcacactt
cagtcacacaccagagatggcgcgaaagaggccctccagaacctcggagcgaaggtgacc
ggttccgtttcgaagaagaccggattcgtagttgtgggtgacaacccgggttcgaagtac
gacaaggccatgcagttgaaggtccccgtgctggacgatgatggcttcgcggtgctgctg
gagcagggtccggacgcagcgcgagcggtagctgtcactccgcctgaggaggagtga
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