Salinispora arenicola: Sare_0888
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Entry
Sare_0888 CDS
T00613
Name
(GenBank) Radical SAM domain protein
KO
K11779
FO synthase [EC:
2.5.1.147
4.3.1.32
]
Organism
saq
Salinispora arenicola
Pathway
saq00680
Methane metabolism
saq01100
Metabolic pathways
saq01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
saq00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Sare_0888
Enzymes [BR:
saq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.147 5-amino-6-(D-ribitylamino)uracil---L-tyrosine 4-hydroxyphenyl transferase
Sare_0888
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.32 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
Sare_0888
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
CofH_C
DUF6533
Motif
Other DBs
NCBI-ProteinID:
ABV96806
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Position
997764..1000274
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AA seq
836 aa
AA seq
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MVDRTEPGPTDASVRRALRRAASGRALDTDEATALLAARGAELDELLRVAGAIRDAGLRA
AGRPGVVTYSKKVFIPLTRLCRDRCHYCTFATVPHRLPAAFLDRDEVLAIARQGAELGCK
EALFTLGDRPEERWPAARQWLDERGYDSTLDYLRSCAVAVLEETGLLPHLNPGVLSWSEL
QRLKPVAPSMGMMLETTATRLWSSPGGPHYGSPDKEPAVRLRVLDDAGRVNVPFTTGVLI
GIGETPVERVEALFAIRRAHREYGHLQEVIVQNFRAKPDTAMRGMPDATLHDLAATVAVT
RVLLGPQARVQAPPNLIAGEYDLLLRAGIDDWGGVSPLTPDHVNPERPWPQLDELSRRTE
QAGFSLRERLTVYPEYVRAGDPWLDPRLLPHVGALADPATGLARPTARPVGRPWQEPDEE
YGGRTDLHATIDTTGRTADRRGDFDQVYGDWSMVADRVGAGATVGVGDHELRAGLRLAAD
DPAALLEPGHTEAALALFAADGPALDELCRIADEVRRDAVGDEVTYVVNRNINFTNVCYV
GCRFCAFAQRDRDADAYRLSVDQIADRAEQAWLAGASEVCLQGGIDPRLPVTAYADLVRA
IKARVPGMHVHAFSPMEIVTAAGKAGVPIREWLTGLREAGLDTIPGTAAEILDDEVRWVL
TKGKLPTAAWVEVVTTAHELGIRSSSTMMYGHVDHPAQWLTHFRVLARTQDRTGGFTEFV
ALPFVHTNAPIYLAGIARPGPTWRENRVVHAMSRLLLHGRVHNIQCSWVKLGDEGSAELL
RGGCNDLGGTLMEETISRMAGSGNGSARTEEQLIAIAAAAGRPARKRTTAYGHRAG
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggttgatcgcacggagccgggcccgaccgacgcgagtgtgcggcgggcgctgcgtcga
gcggcgtccgggcgggcgctggacaccgacgaggcgacggcgcttctcgccgcccggggc
gccgagctggacgagttgctgcgggtcgccggggccatccgggacgcgggactacgcgcg
gccgggcgaccgggcgtggtgacgtactcgaagaaggttttcatcccgcttacccggctc
tgccgggaccggtgtcactactgcaccttcgccacggtgccgcaccggctgccggcggcg
ttcctcgaccgcgacgaggtgctggcgattgcccgtcagggtgcggagctcggctgcaag
gaggcgctgttcacactcggcgaccggccggaggaacgctggccggcagcccgccagtgg
ctggacgagcgcgggtacgactcgaccctggactatctgcgctcctgcgcggtggccgtg
ctggaggagacggggctgctaccgcacctcaaccctggtgtgctcagctggtccgaactg
cagcgactcaagccggtcgcgccgagtatgggcatgatgttggagaccaccgccacccgg
ctgtggtcctccccagggggtccgcactacggttcgccggacaaggaaccggctgtccgg
ctgcgggtactcgacgacgcgggtcgggtgaacgtgccgttcaccaccggtgtcctgatc
ggcatcggtgagaccccggtcgagcgggtcgaggcgctcttcgcgatccgccgggcgcac
cgggagtacggccacctccaggaagtcatcgtgcagaactttcgcgccaagccggacacg
gcgatgcggggtatgcccgacgcgacgctgcacgacctcgctgccacggtggcggtgacc
cgggtgctgctcggtccacaggcccgcgtccaggcgcccccgaacctcatcgcgggtgag
tacgacctgctgctgcgggcaggtatcgacgactggggcggcgtctcgccgttgactccg
gatcacgtgaacccggaacggccctggccgcagctcgacgagttgtctcggcgtaccgag
caggccgggttctccctgcgggagcggctgacggtctacccggagtacgtccgggccggt
gatccgtggctcgacccgcgcctgttgccgcacgtcggtgccctggcggatccggcgacc
gggctcgcgaggcccacggcccggccggtgggccggccgtggcaggaaccggacgaggag
tacgggggccggaccgacctgcacgccaccatcgacaccaccggccgtaccgccgaccgg
cggggcgacttcgaccaggtctacggtgactggtcgatggtggccgaccgggtgggtgcg
ggagcgacagtcggagttggtgatcatgaactgcgggccggtctgcggcttgccgccgac
gatccggcggcgctgctggagcccggacacaccgaggcggcgctggcactcttcgcggcg
gatggtccggcgctcgacgagttgtgccgcatcgcggacgaggtgcgccgggacgcggtc
ggtgacgaggtcacctatgtggtcaaccgcaacattaatttcaccaatgtctgctacgtg
ggctgtcggttctgtgccttcgcgcagcgcgatcgggacgccgacgcgtatcggctctcg
gtggaccagatcgccgaccgggccgagcaggcatggctggccggcgccagcgaggtctgt
ctccaggggggcatcgacccgagactgccggtgacggcctacgccgacctggtgcgggcg
atcaaggcccgggtgccgggcatgcatgtgcacgccttctctcccatggagatcgtcacc
gcggctggcaaggcgggtgtgccgattcgggagtggctgaccgggttgcgtgaggccggg
ctggacaccattcccggcaccgccgccgagatcctcgacgatgaggtgcgctgggtcctc
accaagggcaagctgccgacggccgcctgggtcgaggtggtcaccaccgcccatgagctg
ggaattcgatccagctccacgatgatgtacgggcacgttgaccatcccgcacagtggctc
acgcatttccgggtgctggctcgtacgcaggaccgtacgggtggtttcaccgagttcgtg
gcgctgccgttcgtgcataccaacgcaccgatctacctggccggcatcgcccgcccgggg
ccgacctggcgggagaaccgggtggtgcacgcgatgtcccggctgctgctgcacggacgg
gtccacaacattcagtgttcgtgggtgaagctgggcgacgagggtagtgccgaactgttg
cgtggtggttgcaacgatctgggcggtaccctgatggaggagacgatctcccggatggct
ggctccggcaacgggtcggcccgtaccgaggagcagctgatcgcgatcgcggcggcggcc
gggcggccagcgcgtaagcggacgaccgcctacggtcatcgagccgggtag
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