Caldimonas aquatica: OMP39_05630
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Entry
OMP39_05630 CDS
T08587
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
saqa
Caldimonas aquatica
Pathway
saqa01501
beta-Lactam resistance
saqa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OMP39_05630
01503 Cationic antimicrobial peptide (CAMP) resistance
OMP39_05630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saqa02000
]
OMP39_05630
01504 Antimicrobial resistance genes [BR:
saqa01504
]
OMP39_05630
Transporters [BR:
saqa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OMP39_05630
Antimicrobial resistance genes [BR:
saqa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OMP39_05630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UZD56058
UniProt:
A0ABY6MVN1
LinkDB
All DBs
Position
complement(1239382..1242585)
Genome browser
AA seq
1067 aa
AA seq
DB search
MWFTRVSIANPVMATMVMLAFVVLGLFSYQRLKVDQFPDVEFPVVVVQIEYPGASPEIVE
TEVTKKVEEAVNSIAGINQLFSRSYDSQSVVIIQFNLDVDGRKAAEDVREKVAGIRPLLR
DEVEEPRVLRFDPASRPIYTLALTSPDGSRSPVELTTYADQVVKKRLENVRGVGSVTLVG
AVAREINIYLKPQALEAYGLGVDQVMQAVRADNQDLPAGALRSSENERIVQITGRIQRPE
EFRDIIVARRGPAGSTAPVKLGQIADVVDGPQEVESLALYNGTRTLALDVQKAQGENTID
VVDGLNRVVDELRTELPSGVAVDVVRDNSRPIRVAVSNVRQTLIEGAVLTVVIVFLFLNS
WRSTVITGLTLPIALIGTFLFMYWFGFSINMITLMALSLCVGLLIDDAIVVRENIVRHVQ
MGKDAHRAALDGTHEIGLAVLATTLSIVAVFLPIGFMGGIIGRFFHQFGITIVAAVLISM
FVSFTLDPMLSSVWHDPAIHAEGRPAERRSWYDRTIGRFTAAVDRFTHWLGDVYQAILAW
SLKHKRATLGIAAASLVVSFALVPVMGTEFVPKADFSETSISFYTPTGSSIEVTEAKARQ
VDAILREFPEVKYTLTTINTGQAQGRNYATVYVRLVDRKERQRNVDQMSALLRERLARVP
GITVTHVGLLDPVGGTKPISVSIQGADLQELQRLTSQITERLRQIPGLVDLDTSMKPNKP
TVDVVVHREAASDLGLSVGSVTQALRGLIAGQTVGNWRAPDDQSYDVKVRLAPDARATLP
DLEKLGLTVIGPDGTPKIVRLAQVADVKPSFGPNQINRRDLAREVEITANVSGRSLGEVS
ADIRQVLDTTAFSPGYRAKFGGSTKDMQESFGYALSALALAVIFIYMILASQFKSFLQPI
ALMSSLPLTLIGVVLILLMFGSTLNMFSIIGVIMLMGLVTKNAILLVDFANRAREGASGE
GLAGQKLDREAALLLAARVRLRPILMTTLAMVFGMVPLAFALSEGAEQRSPMGQAVIGGV
VTSSLLTLVVVPVIYCYLDDFSTWIKRKLRGRRPVPAAVGLGTGEAK
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttacccgggtctcgatcgccaatcccgtgatggccacgatggtgatgctcgcc
ttcgtggtgctgggactcttttcctaccagcggctcaaggtcgatcagttccccgacgtc
gagtttcccgtcgtcgtggtgcagatcgaataccctggcgcctcaccggagatcgtcgag
accgaagtgaccaagaaggtcgaggaggccgtcaactcgatcgccgggatcaaccagctc
ttctcgcgcagttacgacagccagtcggtcgtcatcatccagttcaacctggatgtggac
ggccgcaaggccgcggaggacgtgcgcgagaaggtggcgggcatccgcccgctgctgcgt
gacgaggtggaggagccgcgcgtgctgcgcttcgaccccgcctcgcgcccgatctacacc
ctggccctcacctcccccgacggtagccgcagcccggtcgaactcacgacctacgccgac
caggtcgtcaagaagcgcctcgagaacgtgcgcggcgtgggatcggtgacgctcgtcggc
gcggtggcgcgcgagatcaacatctacctcaagccgcaggccctggaggcctacggcctg
ggcgtcgatcaggtcatgcaagccgtgcgcgccgacaaccaggatctgccggccggcgcg
ctgcgatcgagcgagaacgagcgcatcgtccagatcaccgggcgcatccagcggccggag
gagttccgcgacatcatcgtcgcgcgacgcggcccggcgggcagcaccgcccccgtgaag
ctgggtcagatcgccgacgtggtcgacggcccgcaggaagtggaaagcctcgccctctac
aacggcacgcgcaccctcgcgctggacgtacaaaaggcccaaggcgagaacaccatcgac
gtggtggacgggctgaaccgggtggtggacgaattgcgcaccgaactgccctccggcgtc
gcagtggacgtggtgcgcgacaactcgcgtccgatccgggtggccgtgagcaacgtgcgc
cagacgctgatcgaaggcgcggtcctcacggtggtgatcgtcttcctgttcctcaactcc
tggcgctccacagtcatcaccggcctgacgttgccaatcgcgctgatcggcacgttcctc
ttcatgtactggttcggcttttcgatcaacatgatcacgctgatggcgctcagcctgtgc
gtgggcttgctgatcgacgacgcgatcgtcgtgcgagagaacatcgtgcgccacgtgcag
atgggcaaggacgcccaccgagccgcgctggacggtacgcacgagatcggcctggcggtg
ctggccacgacgctgtccatcgtcgcggtgtttctgcccatcggcttcatgggcggcatc
atcgggcggttcttccaccagttcggcatcacgatcgtcgcagcggtgctgatctcgatg
ttcgtgagcttcacgctggacccgatgctctccagcgtgtggcacgacccggccattcat
gccgagggtcggcctgccgagcggcggtcgtggtacgaccgcaccatcgggcggttcacc
gccgcggtcgatcgcttcacgcactggttgggcgacgtctaccaagccatcctcgcgtgg
tcgctcaagcacaaacgggccacgctcggcatcgcggcggcgagcctggtggtgagcttc
gcgctcgtaccggtgatgggcaccgagttcgtgcccaaggcagacttctccgaaacgtcc
atcagcttctacacgcccaccggctcctccatcgaggtgacggaggccaaggcgcgccag
gtggatgccatcttgcgcgagtttcccgaggtcaagtacacgctgaccacgatcaacacc
ggacaggcgcaaggcaggaactacgccaccgtctacgtgcggctcgtggatcgcaaggag
cgccagcgcaatgtcgaccaaatgtcggccctgctgcgcgagcgactggcccgggtgccg
ggcatcaccgtgacccatgtcggcctgctcgacccggtgggcgggaccaagccgatctcg
gtatcgatccaaggcgcggacctgcaggagttgcaacggctgacgagccagatcaccgag
cgactgcggcaaatccccggcctggtggacctggacaccagcatgaagccgaacaagccc
acggtggacgtcgtcgtgcaccgcgaagcggcctccgatctgggcctcagcgtgggtagc
gtcacccaggccctgcgcggcctcatcgcgggccaaacggtcggcaactggcgcgccccg
gatgaccagagctacgacgtcaaggtgcggctcgcccccgatgcccgagccacgctgccc
gacctggagaaactggggctgacggtgatcggcccggacggcacgccgaagatcgtgcgg
ctcgcgcaggtcgccgacgtgaagccctcgttcggtcccaaccagatcaaccgccgcgac
ctggctcgcgaggtcgagatcacggccaacgtctcgggccgctcgctgggcgaagtctcc
gccgatatccggcaggtgctcgacaccactgccttctcgcccggctatcgggccaagttc
ggcggctccaccaaggacatgcaggagtccttcggctatgcgctctccgcgctcgcgctc
gcagtgatcttcatctacatgatcctagcgtcgcagttcaagagcttcctgcagcccatc
gcgttgatgtcgtctctgccgctgacgctcatcggcgtcgtgctcatcctgctgatgttc
ggctcgacgctcaacatgttctcgatcatcggcgtcatcatgctgatgggcctggtcacg
aagaacgccatcttgctggtggatttcgccaaccgggcgcgcgaaggcgccagcggcgag
ggcttggccggccagaaactcgaccgcgaggccgcgctgctgctggcggcccgcgtgcgc
ttgcggccgatcctgatgaccaccttggcaatggtgttcggcatggtgccgctggccttc
gcgctgtccgagggcgccgagcagcgctcgccgatggggcaggcggtgatcggcggcgtc
gtcacctcctcgctgctgaccctggtcgtggtgccggtcatctactgctatctggacgac
ttctcgacgtggatcaagcgcaagctgcgcggacgtcgccccgtgccggcggcggtgggg
ctcgggacgggtgaggcgaaataa
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