Caldimonas aquatica: OMP39_05635
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Entry
OMP39_05635 CDS
T08587
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
saqa
Caldimonas aquatica
Pathway
saqa01501
beta-Lactam resistance
saqa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OMP39_05635
01503 Cationic antimicrobial peptide (CAMP) resistance
OMP39_05635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
saqa03036
]
OMP39_05635
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saqa02000
]
OMP39_05635
01504 Antimicrobial resistance genes [BR:
saqa01504
]
OMP39_05635
Chromosome and associated proteins [BR:
saqa03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OMP39_05635
Transporters [BR:
saqa02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OMP39_05635
Antimicrobial resistance genes [BR:
saqa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OMP39_05635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
OEP
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
UZD56059
LinkDB
All DBs
Position
complement(1242597..1243739)
Genome browser
AA seq
380 aa
AA seq
DB search
MKLHLKWLLPLLATLLIVALAVRGVTQRRAEQARAAAPRAPVALELAPSDVVTAARLEVV
RTLEVSGTIEAVRTAMVKAKVAGEVRELHVREGDAVRAGQVVATLDATEYAARLRQAQQQ
AESARAQLEIAERTLQNNRALVEQGFISRNALDTSVSNAAAARANLLAAQAAADVARKAM
DDAVLRAPIAGSVSQRLVQPGERVGVDGRIVEIVDLRELELEAAVPPDQVGAVRVGAKAT
LRVDGVDAAVTARVARINPSTQAGTRAVPVYLAVAPHEGLRHGLFATGRIELDRQAGIAV
PESAVRLDEARPYVLLVQGEQVVRRAVELGPRGEVGGRAVRIVRSGLAEGDRVLAGTVGI
VREGTRVKLTPVIGASAAGH
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacatctcaagtggctgctgcccctgctggccaccctcctcatcgtcgcgttg
gccgtgcgtggggtgacccagcgccgcgccgagcaggcccgcgcagcggctcccagagcg
cccgtggccctcgagctggccccgtccgacgtcgtgacggccgcccgcctggaggtggtg
cgtacgctggaggtctcgggcaccatcgaggcggtccgcaccgcgatggtcaaggccaag
gtcgccggcgaagtgcgcgagctgcacgtgcgcgaaggcgacgcggtgcgcgcaggacag
gtcgtcgccacactggatgccaccgagtacgcggcccggctgcgccaggcacagcagcaa
gccgagtcggcccgcgcccagttggagatcgcggagcgcacgctgcagaacaaccgggcc
ctggtggagcaaggcttcatctcgaggaacgcactggacacgtcggtgtccaacgcggcc
gcagcgcgtgccaatctgctggccgcccaggccgctgccgacgtggcgcgcaaggccatg
gacgatgccgtgctcagggccccgattgcaggttcggtctcgcagcgcctggtgcaaccg
ggcgagcgggtgggcgtggatggccgcatcgtcgaaatcgtggacctgcgagagctcgag
ctcgaggcggccgtgccccccgaccaggtcggggcagtgcgggtgggcgcgaaggccacc
ctgcgcgtcgacggagtggacgcggcggtcaccgcgcgtgtggccaggatcaacccgagc
acccaggccggcacgcgggcagtgcccgtgtacctggccgtggcgccccacgagggcctg
cgccacggactcttcgcgaccgggcgcatcgagctcgaccggcaagccggcatcgccgtg
ccggagagcgcggtgcggctggacgaggcgcgcccgtacgtgctgctcgtgcagggtgaa
caggtcgtgcgccgtgctgtcgaactcggcccgcgcggcgaggtgggcgggcgcgccgtg
cgcatcgtgcgcagcgggctggccgagggcgaccgggtgttggccggcacggtgggcatc
gtgcgcgaaggcacgcgcgtgaagctcaccccggtgatcggcgcctccgcggcaggccac
tga
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