Caldimonas aquatica: OMP39_08825
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Entry
OMP39_08825 CDS
T08587
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
saqa
Caldimonas aquatica
Pathway
saqa01501
beta-Lactam resistance
saqa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OMP39_08825
01503 Cationic antimicrobial peptide (CAMP) resistance
OMP39_08825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saqa02000
]
OMP39_08825
01504 Antimicrobial resistance genes [BR:
saqa01504
]
OMP39_08825
Transporters [BR:
saqa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OMP39_08825
Antimicrobial resistance genes [BR:
saqa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OMP39_08825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UZD53799
LinkDB
All DBs
Position
complement(1953024..1956113)
Genome browser
AA seq
1029 aa
AA seq
DB search
MQLPEVSIRRPVFATVLSLLLVLIGLVSFTRLQVREYPRIDEPTVTVSTRLVGASSEVIE
SQVTKPLEDSIAGIDGVDVITSISRQEQSQITVRFKLEKSPDDAAADVRDRVSRVRGRLP
DSVDEPVISKVEADASPTIWLAFTTERLTPLQVTDLANRVVKPRLQTVPGVADVLIRGER
VFAMRVWLDADKLAAYGVTVQDVEDALRRQNLEVPAGRIEGPQREFSVTAQTDLNTPEQF
GAVALRQVNGYTVRLRDVARIEQAPASERSSTRLNGRASVSLGVIRQATANPLEVSAGVQ
QILPRLREELPDDVQIQLANDNSVFIDRSIKAVYSTILEAVVLVALVVFVFLRTLRASVI
PLVTIPVSLIGAFALMALAGFTMNTLTLLALVLAIGLVVDDAIVVLENIYRHVEEGMMPF
AAAIKGAREIGFAVVAMTLTLAAVYAPLAFTPGRTGRLFVEFALTLAGAVIVSGFVALTL
SPMMCSKLLRHSSKHSGFDRWMGRQLDRLATGYESVLGWTLHHRWLIVIVMLVCGVASWL
LFKGMKSELSPMEDRGVVLVNVNAPDGSTLAYTEKYMREIERVGLGFEEFDRVFVVAGNP
TVSQGISFMRTVDWSERERSTMELAQALQPKLSALPGVNAFPITPPSLGQGFRERSVNFV
IVTSDSYQNLAQVAQKFVDAMNRHGRFVQPDIDLRMNKPEIYIEVDRERAADAGVSVDQV
ARTIETMLGGRNVTRYKRDADQYDVIVQTDASGRTTPADIERLFVRGRNEAMIPLASLVR
VKEAVSPRELNHFNQRRSVSITANLAPGFSLGEALDFLDAQARELLPSGYATELNGVSRE
FRSSSGALGLVFVLALLFIFLVLSAQFESFVDPFIIMLSVPLSMVGALLALKLSGGTLNV
YSQIGLITLVGLITKHGILIVEFANQRRQQGEAVLEAVRHAAALRLRPILMTTGAMVLGA
LPLALAEGAGAESRQQIGWVIVGGMTLGTLLTVFVVPTMYSLFARKGTPGPITTPVSLDA
PEQGEQYGK
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcctgaagtctcgatccgacggcccgtcttcgcgacggtgctctccctcctg
ctggtgctgatcggcttggtgtcgttcacccgcctgcaggtgcgcgagtacccgcgcatc
gacgagccgacggtcactgtctcgacccgtctggtcggtgcctcctcggaagtgatcgag
tctcaggtcaccaagccgctggaggactcgatcgcgggcatcgacggcgtggatgtgatc
acctcgatctcgcggcaggagcaaagccagatcacggtgcgcttcaagctcgagaagagc
cccgacgacgcggcggccgatgtccgcgaccgcgtctcgcgcgtgcgcgggcgcctgccc
gattcggtcgacgagccggtgatctcgaaggtcgaggcggacgcctcgccgacgatctgg
ctcgctttcacgaccgagaggctcacgccgctgcaggtcaccgatctcgccaaccgcgtc
gtgaagccgcgcctgcagacggtgccgggcgtggccgatgtgctgatccggggcgagcgc
gtctttgcgatgcgcgtctggctcgacgccgacaagctggcggcctatggcgtcaccgtc
caggacgtcgaggacgcgctgcgacggcagaacctggaagtgccggccggccgcatcgaa
ggcccgcagcgcgagttcagcgtgaccgcccagaccgatctcaatacgcccgagcagttc
ggcgcggtcgcgttgcggcaggtcaacggctacaccgtgaggttgcgcgacgtcgcccgc
atcgagcaggccccggcgagcgagcggtcgagcacgcggctcaacgggcgcgcctccgtt
tcgctgggggtgatccggcaggctacggcgaacccgctggaggtctcggccggggtgcag
cagatcctgccgcggctgcgcgaggagctgcccgacgacgtgcagatccagctggcgaac
gacaactcggtgttcatcgaccgctccatcaaggctgtgtactcgacgatcctggaagcg
gtcgtgctggtggcgctggtggtgttcgtgttcctgcgtacgttgcgcgcctcggtcatc
ccgctggtcaccattccggtcagtctcatcggcgcgttcgcgctgatggccctggcgggc
tttacgatgaacacgctgaccctgcttgcgctggtgctcgccatcggcctcgtggtcgac
gatgcgatcgtcgtgctggagaacatctaccggcacgtcgaggagggcatgatgcccttt
gccgcagccatcaaaggggcgcgcgagatcgggttcgccgtggtggcgatgacgctcacg
ctggccgccgtctatgcgccgctcgcgttcacaccgggccgcaccggccggctgttcgtg
gagttcgcgctgacgctcgcgggtgcggtgatcgtctcgggcttcgtggcgctcacgcta
tcgcccatgatgtgctcgaagctgctgcggcacagctcgaagcacagcgggttcgaccgc
tggatggggcggcagctcgatcggctggccaccggctacgagtccgtgctcggatggacg
ctgcaccaccgctggctgatcgtgatcgtgatgctggtgtgcggcgtggccagctggctg
ctgttcaagggcatgaagagcgagctctcgccgatggaggatcgcggcgtggtgctcgtc
aacgtgaacgcgccggacggctcgacgctcgcctacaccgagaagtacatgcgcgagatc
gagcgtgtcggtctcggcttcgaggagttcgaccgcgtcttcgtcgtcgcgggcaatccg
accgtgtcgcagggcatctcgttcatgcgcacagtggactggagcgagcgcgagcgaagc
acgatggagctggctcaggcgttgcagcccaagctgtcggcgctaccgggcgtgaacgcg
tttccgatcacgccgccctcgttggggcagggtttccgcgagcgctcggtcaacttcgtc
atcgtcacctccgacagctaccagaacctcgcccaggtcgcgcagaagttcgtggatgcg
atgaaccggcatggccgcttcgtgcaacccgacatcgacttgcgcatgaacaagcccgag
atctacatcgaggtggaccgcgagcgcgccgcggacgcaggcgtctcggtggatcaggtt
gcgcgcaccatcgagacgatgctcggcggacgcaacgtgacccgctacaagcgcgatgcc
gaccagtacgacgtcatcgtgcagaccgacgccagcgggcgcacgacaccggccgacatc
gagcggctgttcgtgcggggccgcaacgaggcgatgatcccgctcgcgtcgctggtgcgg
gtgaaggaggccgtctcgcctcgcgagctgaaccacttcaaccagcgccgttcggtttcg
atcacggccaacctggcgccgggcttttcgctgggcgaggcgctggacttcctcgacgcc
caggcgcgggagctgcttccctcgggctacgcgaccgagctcaacggcgtgtcgcgtgag
ttccgctcctccagtggcgcgctgggcttggtgtttgtcttggcgctgctgttcatcttc
ctcgtcctgtcggcgcagttcgagagcttcgtcgatcccttcatcatcatgctgtcggtg
ccgctttcgatggtgggcgccttgctggccctcaagctgagcgggggcaccttgaacgtc
tattcgcagatcggcctcatcacgctggtaggcctgatcacgaagcacggcatcctgatc
gtggagttcgccaaccaacgtcgccagcagggcgaggccgtgctcgaggcggtccggcac
gcagcggcgctgcgccttcggcccatcttgatgaccacaggcgcgatggtgctcggggcc
ctgccgctcgcgctcgccgaaggcgcaggtgccgagagccgccagcagatcggctgggtg
atcgtgggcggtatgacgctcggcacgctgctgacggtcttcgtggtgccgacgatgtac
agcctgttcgcgcgcaagggcacacccggtcccatcacgacgcccgtgtcgctcgacgca
cccgagcagggtgagcagtacggcaagtga
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