Caldimonas aquatica: OMP39_08830
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Entry
OMP39_08830 CDS
T08587
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
saqa
Caldimonas aquatica
Pathway
saqa01501
beta-Lactam resistance
saqa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OMP39_08830
01503 Cationic antimicrobial peptide (CAMP) resistance
OMP39_08830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
saqa03036
]
OMP39_08830
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saqa02000
]
OMP39_08830
01504 Antimicrobial resistance genes [BR:
saqa01504
]
OMP39_08830
Chromosome and associated proteins [BR:
saqa03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OMP39_08830
Transporters [BR:
saqa02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OMP39_08830
Antimicrobial resistance genes [BR:
saqa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OMP39_08830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
UZD53800
LinkDB
All DBs
Position
complement(1956153..1957421)
Genome browser
AA seq
422 aa
AA seq
DB search
MKKYHALVAAVGIAVLSAGAYWYQREPIRPASEGRSDATAHGPTSAPRPAGAGAPAGGAG
ARGPVAVEMAPVQTAILSEAAQAVGSLRSRQGVMLRPEVSGRVIALGFRDGQPVRKGQVL
VQLDDTLAAAQVRQAQAQLSIARANHERNRELLAQNFVSQAAVDQTAATLQVAEAQLAVA
RATQERLRIVAPFDGVAGIREVNVGDYVGPGTDLVNLEDVSSLYVDFRLPERYLPQLQVG
QRSQVSLDALPGRRFEARIEALSPQVDAQGRSVLIRAVLNNREGALRPGMFARVDTLLSS
KTDALVVPEEALVPQGGKQYVIKAVKAEGAEGASWTSQRREVSIGLRRAGQVEILQGLDR
GDMVVVAGHQRIQRDGTPLRPVQIGERGSSAASAPSAAGGTRDAQRGTAAPATSGTKVAA
RN
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtaccacgccctcgttgctgccgtcggcatcgctgtgctgagcgccggcgcc
tattggtatcagcgcgagcccatccggccggcgagcgagggccggtcggatgcgacggcc
catgggccgacttccgccccccgtcccgccggagcgggggcaccggccggcggcgcgggc
gcacgcgggccggtggcggtcgaaatggcacccgtgcagaccgccatcctgtcggaggcg
gcccaagcggtcggctcgctgcgctcgcggcagggcgtcatgctgcgccccgaggtgtcc
gggcgcgtcatcgccctcggtttccgcgatggacaaccggtgcgcaaggggcaggtgctc
gtccaactggacgatacgctggccgccgcgcaggtgcggcaggcccaggcgcagctcagc
atcgcgcgcgccaatcacgagcgcaaccgcgagctgctggcgcagaacttcgtgagccag
gcggcggtggaccagacggcggcgaccctccaggtggccgaggcgcaactggcggtcgcc
cgtgccacccaggagcgcttgcgcatcgtcgcccccttcgacggtgtggcgggcatccgc
gaggtcaatgtgggcgactacgtcgggcctggcaccgatctcgtcaatctcgaggacgtg
agcagcctgtacgtcgacttccgcctgcccgagcgctacttgccgcagctgcaggtcggc
cagcgctcgcaggtgagcctggacgcgttgcccgggcgtcgattcgaggcgcggatcgaa
gccttgtcgccccaggtggatgcgcagggccgctcggtgctgatccgcgcggtgctgaac
aaccgcgagggggctttgcgccccgggatgttcgcccgtgtggacacgctgctttcctcg
aagacagacgcgttggtggtgccggaggaggcgctcgtgccgcaagggggcaagcaatat
gtgatcaaggccgtgaaggccgaaggggcggaaggggcctcctggacgtcgcagcgccgc
gaggtgagcatcggtctgcgccgtgccggtcaggtcgagatcctccagggcctggacagg
ggcgacatggtggtggtggccggccaccaacgcatccagcgtgacggtactcccttgcgc
ccggtgcagatcggtgagcgcgggtcctccgcggcctcggcgccatccgctgcgggcggg
acccgcgacgcgcagcggggtacggcggcaccggcgacgtccgggacgaaggtcgcggcg
cgcaactga
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