Streptomyces aquilus: EJC51_43065
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Entry
EJC51_43065 CDS
T07011
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
saqu
Streptomyces aquilus
Pathway
saqu03030
DNA replication
saqu03410
Base excision repair
saqu03420
Nucleotide excision repair
saqu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJC51_43065 (ligA)
03410 Base excision repair
EJC51_43065 (ligA)
03420 Nucleotide excision repair
EJC51_43065 (ligA)
03430 Mismatch repair
EJC51_43065 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saqu03032
]
EJC51_43065 (ligA)
03400 DNA repair and recombination proteins [BR:
saqu03400
]
EJC51_43065 (ligA)
Enzymes [BR:
saqu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EJC51_43065 (ligA)
DNA replication proteins [BR:
saqu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EJC51_43065 (ligA)
DNA repair and recombination proteins [BR:
saqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EJC51_43065 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJC51_43065 (ligA)
MMR (mismatch excision repair)
DNA ligase
EJC51_43065 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EJC51_43065 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
PTCB-BRCT
Nlig-Ia
DNA_ligase_ZBD
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AZP23686
UniProt:
A0A3Q9C775
LinkDB
All DBs
Position
complement(9400826..9402922)
Genome browser
AA seq
698 aa
AA seq
DB search
MIRMTTPAAQIVDAAAYAQAVEDAVKAAAAYYEGGTSPLDDDTYDRLVRGIAQWEDAHPE
QVLPDSPTGKVAGGAVEGDVPHTVPMLSLDNVFSAEEFTTWAASLARRIGHDVTRFSSEP
KLDGLAIAARYTHGRLRQLITRGDGTAGEDVSHAIGTIEGLPDTLSEPVTVEVRGEVLMT
TAQFEHANEVRTQHGGQPFANPRNTAAGTLRAKDRAYTVPMTFFGYGLLPLPGTDTALAD
RLGESAHSDLMAQAAAWGVNTTASTAVPGTTADGVEEVLARVEEIAALRAELPFGIDGVV
IKADLAADQQAAGSGSRAPRWAIAYKLPAVEKITRLLEVEWNVGRTGIIAPRAVLEPVEI
DGSTITYATLHNPADITRRDLRLGDHVMVYRAGDVIPRVEAPVAHLRTGDEQPIVFPEVC
PRCGSDIDTSEQRWRCTNGRNCHLVASLSYAAGRDQLDIEGLGHTRVVQLVDAGLVADLA
DLFTLTREQLLALERMGETSTDNLLAALAAAKGQPLSRVLCALGVRGTGRSMSRRIARHF
ATMDHIRAADAEAMQQVEGIGTEKAPSIVAELAELAPLIDKLVAVGVNMTEPGATPPPAA
DADPAEAPEDAAAADLPLAGMTVVVTGSMSGALEKLSRNQMNELIERAGGRSSSSVSKKT
TLVVAGEGAGSKRAKAEDLGVRLAEPDEFAALVADFLP
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcatgacgacaccagctgcacagatcgtggatgccgccgcctacgcacaggcg
gtcgaggacgcggtgaaggccgcggccgcctactacgagggcggcacctcacccctggac
gacgacacctacgaccggctggtgcgcggcatcgcgcagtgggaggacgcccaccccgag
caggtgctccccgactcccccacgggcaaggtcgccggcggcgcggtggagggggacgtc
ccgcacacggtgccgatgctcagtctcgacaacgtcttctccgccgaggagttcaccacc
tgggccgcctcgctggcgcgccgtatcggccatgacgtcacccgtttcagcagcgagccg
aagctcgacgggctggcgatcgccgcccgctacacccacggccgtctgagacagctgatc
acccgcggggacggcacggccggggaggatgtcagccatgcgatcggcaccatcgagggc
ctgcccgacaccctgtccgagccggtcaccgtggaggtccgcggcgaggtcctgatgacg
acggcccagttcgagcacgccaacgaggtgcgcacacagcacggcggtcagccgttcgcc
aatccgcgcaacaccgcggccggcaccctgcgcgccaaggaccgtgcctacaccgtgccg
atgacgttcttcggctacgggctgctcccgctgcccggcaccgacaccgctctcgccgac
cggctcggcgagagcgcgcacagcgacctgatggcacaggccgccgcgtggggggtgaac
accaccgcgtcgaccgccgtgcccggtaccaccgccgacggcgtcgaggaggtcctggcc
cgggtcgaggagatcgccgcgctgcgcgccgagctgccgttcgggatcgacggcgtcgtc
atcaaggccgacctggccgccgaccagcaggccgccggttccggcagccgtgccccgcgg
tgggcgatcgcctacaagctgccggccgtggagaagatcacgcggctgctggaggtggag
tggaacgtgggccgcaccggcatcatcgccccgcgcgcggtcctggaaccggtcgagatc
gacggctccaccatcacctacgccaccctgcacaacccggccgacatcacccggcgcgac
ctgcgcctgggcgaccacgtcatggtctatcgggccggcgatgtcatcccccgcgtcgaa
gcccccgtcgcccatctgcgcaccggcgacgagcagcccatcgtcttccccgaggtgtgc
ccgcgctgcgggtcggacatcgacaccagcgagcagcgctggcgctgcaccaacggccgc
aactgccacctggtcgcctccctgtcctacgccgcgggccgcgaccagctcgacatcgag
ggcctgggacacacccgggtcgtccagctcgtcgacgccggtctggtcgccgatctcgcc
gatctgttcaccctcacccgtgagcagctcctggccctggagcggatgggcgagaccagc
accgacaacctgctggccgcgctggccgcggccaagggccagccgttgtcccgggtgctg
tgcgcgctcggggtgcggggcaccggccggtcgatgtcccggcggatcgcccggcacttc
gcgaccatggaccacatccgggccgccgacgccgaggcgatgcagcaggtggagggcatc
ggcacggagaaggcgccgtccatcgtcgccgaactcgccgaactggccccgctcatcgac
aagctcgtcgcggtcggggtcaacatgaccgaacccggcgcgacgccgccgcccgcggcg
gacgccgaccctgccgaagcgcccgaggacgccgcggccgcggacctgccgctggcgggg
atgaccgtcgtcgtcaccggctcgatgtccggcgctctcgagaagctctcccgcaaccag
atgaacgagctcatcgaacgtgcgggcggccgctcctcctccagcgtctccaagaagacg
accctggtggtcgccggtgagggcgccggctccaagcgcgccaaggccgaggacctcggc
gtccggctggcggagccggacgagttcgccgcactcgtcgccgacttcctgccctga
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