Staphylococcus aureus subsp. aureus MRSA252 (MRSA): SAR1996
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Entry
SAR1996 CDS
T00182
Symbol
lig
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sar
Staphylococcus aureus subsp. aureus MRSA252 (MRSA)
Pathway
sar03030
DNA replication
sar03410
Base excision repair
sar03420
Nucleotide excision repair
sar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAR1996 (lig)
03410 Base excision repair
SAR1996 (lig)
03420 Nucleotide excision repair
SAR1996 (lig)
03430 Mismatch repair
SAR1996 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sar03032
]
SAR1996 (lig)
03400 DNA repair and recombination proteins [BR:
sar03400
]
SAR1996 (lig)
Enzymes [BR:
sar01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
SAR1996 (lig)
DNA replication proteins [BR:
sar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SAR1996 (lig)
DNA repair and recombination proteins [BR:
sar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
SAR1996 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAR1996 (lig)
MMR (mismatch excision repair)
DNA ligase
SAR1996 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAR1996 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
RNA_pol_A_CTD
PTCB-BRCT
Zn_ribbon_NUD
HHH
zf-IS66
DUF7575
Motif
Other DBs
NCBI-ProteinID:
CAG40981
UniProt:
Q6GFF3
LinkDB
All DBs
Position
complement(2085989..2087992)
Genome browser
AA seq
667 aa
AA seq
DB search
MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEFKTVDSPTV
RVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIGNVEYMCELKIDGLAVSL
KYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPLNVEVRGEAYMPRRSFLRLNE
EKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNARSQSEALDELD
KLGFTTNKNRARVSDIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSP
RWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTAILEPVKVAGTTVSRASLHNEDLIHDR
DIRIGDSVVVKKAGDIIPEVVRSIPERRPEDAVTYHMPTHCPSCGHELVRIEGEVALRCI
NPKCQAQLVEGLIHFVSRQAMNIDGLGTKIIQQLYQSELIKDVADIFYLTEEDLLPLDRM
GQKKVDNLLAAIQQAKDNSLENLLFGLGIRHLGVKASQVLAEKYETIDRLLTVTEAELVE
IHDIGDKVAQSVVTYLENEDIRALIQKLKDKHVNMIYKGIKTSDIEGHPEFSGKTIVLTG
KLHQMTRNEASKWLASQGAKVTSSVTKNTDVVIAGEDAGSKLTKAQSLGIEIWTEQQFVD
KQNELNS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttatcgtctcgtgtgaacgagttacatgatttattaaatcaatacagttat
gaatactatgtagaggataatccatctgtaccagatagtgaatatgacaaattacttcat
gaactgattaaaatagaagaggagcatcctgagtttaagactgtagattctccaacggtt
agagttggtggtgaagcccaagcctctttcaataaagtcaaccatgacacgccaatgtta
agtttagggaatgcatttaatgaggatgatttgagaaaattcgaccaacgcatacgtgaa
caaattggcaacgttgaatatatgtgcgaattaaaaattgatggcttagcagtatcattg
aaatatgttgatggatacttcgttcaaggtttaacacgtggtgatggaacaacaggtgaa
gatattaccgaaaatttaaaaacaattcatgcgatacctttgaaaatgaaagaaccatta
aatgtagaagttcgtggtgaagcatatatgccgagacgttcatttttacgattaaatgaa
gaaaaagaaaaaaatgatgagcagttatttgcaaatccaagaaacgcagctgcggggtca
ttaagacagttagattctaaattaacggcaaaacgaaagctaagcgtatttatatatagt
gtcaatgatttcaccgatttcaatgcgcgttcgcaaagtgaagcattagatgagttagat
aaattaggttttacaacgaataaaaatagagcgcgcgtcagcgatatcgatggcgtttta
gaatatattgaaaaatggacaagccaaagggaatcattgccatacgatatcgatggtatt
gtgataaaggttaatgatttagatcagcaggacgaaatgggattcacacaaaaatcacca
agatgggccattgcttataaattcccagctgaggaagtggtaactaaattattagatatt
gaattaagtattggacgtacaggtgtagtcacacctactgctattttagaaccagtaaaa
gtagctggtacaactgtatcaagagcatccttgcacaatgaagatttaattcatgacaga
gatattcgaattggtgatagtgttgtagtgaaaaaagcaggtgacatcatacctgaagtt
gtacgtagtattccagaacgtagacctgaggatgctgtcacatatcatatgccaacccat
tgtccaagttgtggacatgaattagtacgtattgaaggcgaagtagcacttcgttgcatt
aatccaaaatgccaagcacaacttgttgaaggattgattcactttgtatcaagacaagcc
atgaatattgatggtttaggcactaaaattattcaacagctttatcaaagcgaattaatt
aaagatgttgctgatattttctatttaacagaagaagatttattacctttagacagaatg
gggcagaaaaaagttgataatttattagctgccattcaacaagcaaaggacaactcttta
gaaaatttattattcggtctaggtattaggcatttaggtgttaaagcgagccaagtgtta
gcagaaaaatatgaaacgatagatcgattactaacagtaactgaagcggaattagtagaa
attcatgatataggtgataaagtagcacaatctgtagttacttatttagaaaatgaagat
attcgtgctttaattcaaaaattaaaagataaacatgttaatatgatttataaaggtatc
aaaacatcagatattgaaggacatcctgaatttagtggtaaaacgatagtactgactggt
aagctacatcaaatgacacgcaatgaagcatctaaatggcttgcatcacaaggtgctaaa
gttacaagtagcgttactaaaaatacagatgtcgttattgctggtgaagatgcaggttca
aaattaacaaaagcacaaagtttaggtattgaaatttggacagagcaacaatttgtagat
aagcaaaatgaattaaatagttag
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