Sorex araneus (European shrew): 101538737
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Entry
101538737 CDS
T07854
Symbol
SMCR8
Name
(RefSeq) smith-Magenis syndrome chromosomal region candidate gene 8 protein
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04140
Autophagy - animal
sara05014
Amyotrophic lateral sclerosis
sara05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101538737 (SMCR8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101538737 (SMCR8)
05022 Pathways of neurodegeneration - multiple diseases
101538737 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101538737 (SMCR8)
Membrane trafficking [BR:
sara04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
101538737 (SMCR8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
eRF1_1
Motif
Other DBs
NCBI-GeneID:
101538737
NCBI-ProteinID:
XP_004612890
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MISAPDVVAFTKENEYEEEPYNEPALPEEYSVPLFPFASQGANPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSKAS
ECLKTGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYSSQAIEKANELASVE
KSIIEHQDLLKQIRSYPHRKLRGADLYSGEVERSQDQACQAATTSNPDEFADADLYSCRP
AYTPKLIKAKSTKCFDKKLKTLEELCDTEYFTQTLAQLSHIEHMFRGDLCYLLTSQIDRA
LLKQQHITNFLFEDFVEVDDRLVEKQESIAPKPVQDRPPSRTLEEYPIPQVLISVGSYKS
SVESVLIKMEQELGDEEYKEAEVAELSSFDPQENLDYLDMEMKGSISSGESIEVLGTEKS
TSVLSKSDSQASLTVPLSPQVVRSKAVSNRTISEDSIEVLSTCPSEALIPEDLKASYPSA
INEEESYPDDSEGAILFQANISPPELDGAEEGSLENPLSEMDSSCCIGKESDSLQRPLPA
ATHTLLDDDGVVSIPPQRYWQNDQGFHADLAIENTSPSQDHSSESFTAYELDPSHLLASR
DVSKTSLDNYSDSTSCVGSVASTGSDRTPTAHFTAPSSERHKKRAGQNALKFIRQYPFAH
PAIYSLLSGRTLVVLGEDETIVRKLVSALSIFVPNYSRCAKPVKHWVSSPLHITDFQKWK
LIGLQRVASPASASMLHTLSRYCRYTSILDLDNKTLRCPLYRGTLVPRLADHRTQIKRGS
TYYLHVQSMLTQLCSKAFLYTFCHHLHLPAHDKETEDLVASRQASFLKLNLGLVNEDVKV
VQYLAELLKLYYMQEAPGISHPTLRFDYVPSFLYKI
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtggtggccttcaccaaagagaatgagtacgaggaggagcct
tacaatgagccggccctgcccgaggagtactcggtgcccctttttcccttcgccagccaa
ggagccaacccttggtccaaactgtccggagccaagttctcgcgggacttcatcctcatt
tccgagttctccgaacaggtgggcccccaaccattgctaaccatccccaatgacaccaaa
gtttttggtacctttgatcttaattacttctccttaaggatcatgtctgtcgattaccag
gcctccttcgtaggccatccccccggctctgcctaccccaagctaaacttcgtggaggac
tccaaggtggtgctgggagactccaaggagggagcctttgcttatgtgcaccatctgacc
ctgtatgacctggaggcccgtggttttgtgaggcccttttgcatggcttatatctcagca
gaccagcacaaaatcatgcagcaatttcaggaactttcagcagaattttccaaagcgtct
gagtgcttgaagacaggcaacaggaaggcatttgctggggaacttgaaaaaaagctgaaa
gacttggattataccaggactgtgctacatactgaaacagaaatccagaagaaagccaac
gataaaggtttttattcatctcaggcaattgagaaagccaatgaactggctagcgtagag
aaatccatcatcgagcatcaagacctgctaaagcagatccgttcatatcctcatcggaag
ttgaggggggctgatttgtattctggagaggtagagcgctcccaggatcaagcctgccag
gcagccactacctctaaccctgatgagtttgctgacgcagacctttactcctgcagacca
gcctataccccaaaactcatcaaagccaagtccaccaagtgttttgataagaagttaaag
accttggaagagctctgtgacaccgagtattttacccagaccttggctcagctcagccac
attgagcacatgttccgcggagacctgtgctatctcctgaccagccagattgacagggca
ctgctaaaacaacagcatataaccaactttctcttcgaggactttgtggaggttgatgat
aggctggtagagaaacaagagagtatagcccctaaacctgttcaagatagaccaccttcc
agaactctggaagaatatccaattcctcaagtgttaattagtgttggctcttacaaatcc
agtgtggagtctgtgctgatcaagatggagcaggaactgggagatgaggagtacaaagaa
gcagaggtggcagaattgagcagttttgacccccaggagaacttggactacctggatatg
gaaatgaaagggagtatcagcagtggtgaaagcatcgaggttctgggcacggaaaagtcc
acctctgtgctctccaagtctgacagtcaggccagccttacggtgccactgagtccccag
gtagttcgcagcaaagcggtcagcaacagaaccatcagtgaggacagtattgaagtcctc
agcacctgcccgtccgaggctctcatccccgaggaccttaaggccagctacccaagtgcc
attaacgaagaagaatcctacccagatgatagtgagggagccatcctcttccaggcaaac
atcagccctccagagctggatggcgcagaggagggcagcttggaaaatcccctatcagag
atggactcttcctgctgcattgggaaggagagtgacagtctgcagcggccacttcctgct
gcaacccacacgctcttagatgacgatggagtggtgagcatccccccacagcgctactgg
caaaatgaccagggcttccacgcggacttggccattgaaaacaccagcccttctcaagac
cacagttctgagagcttcactgcctatgagctggacccgagccatctgctagctagccgg
gatgttagtaagaccagcctggacaactactccgactccaccagctgtgtgggcagtgta
gcctccactggctcggacaggactcccactgctcatttcactgctccctcttccgagaga
cataaaaagagagctggccagaatgccttaaaatttatccgccagtacccttttgcccac
ccagctatctactccctactcagcgggaggacactcgtggtcctgggggaagatgaaacc
atagtcaggaagctcgtgtcggcgctgtccatctttgttcccaactacagccgttgtgcc
aaacccgtgaagcactgggtgtcctcccctctgcacattactgatttccagaagtggaag
cttattggcctacagagagtggcatcccctgccagtgccagcatgctgcacacactgagc
cgctactgccgctacacaagcattctggacctggacaacaaaaccctgcgctgcccactc
tacagaggcacgcttgtgccccggctggcagaccaccgtacccagatcaagcgaggcagc
acctactacctgcacgtccagagcatgctcactcaactctgctccaaggctttcctctac
acattttgccaccacctgcacctgcctgcccatgacaaggagactgaggacctggtcgct
agccgccaagcgagcttcctgaagctgaacctgggtctggtgaacgaagatgtcaaagtg
gtccagtacctggctgagttgctgaagctgtactatatgcaggaggctcctggaatcagc
caccccacgctcaggtttgactatgtccccagctttttgtacaaaatctga
DBGET
integrated database retrieval system
