KEGG   Sorex araneus (European shrew): 101539188
Entry
101539188         CDS       T07854                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DQ beta 1 chain-like
  KO
K06752  MHC class II antigen
Organism
sara  Sorex araneus (European shrew)
Pathway
sara04145  Phagosome
sara04514  Cell adhesion molecules
sara04612  Antigen processing and presentation
sara04640  Hematopoietic cell lineage
sara04658  Th1 and Th2 cell differentiation
sara04659  Th17 cell differentiation
sara04672  Intestinal immune network for IgA production
sara04940  Type I diabetes mellitus
sara05140  Leishmaniasis
sara05145  Toxoplasmosis
sara05150  Staphylococcus aureus infection
sara05152  Tuberculosis
sara05164  Influenza A
sara05166  Human T-cell leukemia virus 1 infection
sara05168  Herpes simplex virus 1 infection
sara05169  Epstein-Barr virus infection
sara05310  Asthma
sara05320  Autoimmune thyroid disease
sara05321  Inflammatory bowel disease
sara05322  Systemic lupus erythematosus
sara05323  Rheumatoid arthritis
sara05330  Allograft rejection
sara05332  Graft-versus-host disease
sara05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:sara00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    101539188
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    101539188
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    101539188
   04612 Antigen processing and presentation
    101539188
   04658 Th1 and Th2 cell differentiation
    101539188
   04659 Th17 cell differentiation
    101539188
   04672 Intestinal immune network for IgA production
    101539188
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    101539188
   05164 Influenza A
    101539188
   05168 Herpes simplex virus 1 infection
    101539188
   05169 Epstein-Barr virus infection
    101539188
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    101539188
   05152 Tuberculosis
    101539188
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    101539188
   05140 Leishmaniasis
    101539188
  09163 Immune disease
   05310 Asthma
    101539188
   05322 Systemic lupus erythematosus
    101539188
   05323 Rheumatoid arthritis
    101539188
   05320 Autoimmune thyroid disease
    101539188
   05321 Inflammatory bowel disease
    101539188
   05330 Allograft rejection
    101539188
   05332 Graft-versus-host disease
    101539188
  09166 Cardiovascular disease
   05416 Viral myocarditis
    101539188
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    101539188
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sara04147]
    101539188
Exosome [BR:sara04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101539188
  Exosomal proteins of epithelial cells
   101539188
  Exosomal proteins of breast milk
   101539188
SSDB
Motif
Pfam: MHC_II_beta C1-set MHC_I Ig_3 C2-set_2 Ig_2 FAM184 ig DUF1968 Flp1_like
Other DBs
NCBI-GeneID: 101539188
NCBI-ProteinID: XP_004617792
LinkDB
Position
Unknown
AA seq 257 aa
MTLCIPRGLGIVAVIVILVVWSTLVTEGRDTQGTVLFQSKFLCYFTNGTQRVRAVARYIY
NREEFVRFDSDVGNFVAVTEHGEQDAETWNSQEELLEQHRAEVDTLCRHNYEMDAPLASS
QRAQPKVTVYPSRTEALNHHNLLVCLVTDFYPGQVNVQWFRNEQEETAGVVSTPLIRNGD
WSFQIMVMLEMTSQRGDVYTCQVEHLSLETPITVEWRAQSESAWSKMLSGIGGFMLGLIF
LGLGLFIRHKNKKGLLH
NT seq 774 nt   +upstreamnt  +downstreamnt
atgactctgtgtatccctagaggcctggggatagtggctgtgatagtgattctagtggtg
tggagcactctggtgactgagggcagagacactcaagggactgtcctgttccagagtaaa
ttcctgtgctacttcaccaacgggacgcagcgggtgcgggccgtggccagatacatctac
aaccgcgaggagttcgtgcgcttcgacagcgacgtggggaacttcgtggcggtgaccgag
cacggggagcaggacgccgagacctggaactcacaggaggaattactggagcagcatcgg
gccgaggtggacacattgtgcagacacaattatgagatggacgcccccttggcctcgagc
cagcgagcacaacctaaggtgaccgtctacccttccaggacagaggctttaaaccaccac
aacctgctcgtctgtttggtgacagatttctatccaggccaagtcaatgttcagtggttc
cggaatgaacaggaggagacagcaggagttgtatccaccccacttattaggaatggggac
tggagcttccagatcatggtgatgctggaaatgacctcccagcgtggagatgtctacacc
tgccaagtggagcacctcagcctcgagacccctatcacagtggagtggcgagcccagtct
gaatctgcctggagcaagatgctgagtggcattggaggatttatgctggggttgatcttc
cttggactgggcctcttcatccgtcacaagaacaagaaagggctcctgcactga

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