Sorex araneus (European shrew): 101540234
Help
Entry
101540234 CDS
T07854
Symbol
TCF3
Name
(RefSeq) transcription factor E2-alpha isoform X1
KO
K09063
transcription factor E2-alpha
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04550
Signaling pathways regulating pluripotency of stem cells
sara05166
Human T-cell leukemia virus 1 infection
sara05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101540234 (TCF3)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
101540234 (TCF3)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
101540234 (TCF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sara03000
]
101540234 (TCF3)
Transcription factors [BR:
sara03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
101540234 (TCF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Response_reg_2
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
101540234
NCBI-ProteinID:
XP_004614859
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MNQPQRMAPVGTDKELSDLLDFSMMFPLPVPNGKGRPAPLATAQFGGSALEDRPSSGSWA
PGDQNSSSFDGSRTYGAGAHFSEPPSSLPSSTFLGPGLSGKGGERGVAYPAFGRDAGVGS
LTQAGFLPGELALSSPSPLSPSAAKGGSPYYSSYPRRRAADSGLDAQPKKVRKVPPGLPS
SVYPPGSGDDFGRDPAYPAAKTPSSAYPAPFYMPDGSLHPSAELWNPPGQAGFGPMLGGG
SSPLPLSAGGGSSSVAGGGGSGGSFGGXXXXSPQGYPLHGAEVNGALPAVSSFSSGPPAY
GSVSGHTPPVSVSGADSLLGSRGTTAGSSGDALGKALASIYSPDHSSNNFSSSPSTPVGS
PPQGLAGTSQWPRAGAPGALSPNYDGGLHGLVTLPLPQSKLEDHLDEAIHVLRSHAVGSA
GDLHGLLPGHGPLASGFPGPVLPLSGRHTGLVAGGHAEDSLSGTASLAHNPVALPSQPSA
LPDLTRPPDSYSSLGRAGGAAAGEIKREEKEDEENGLAAEPSEEEKKELKALRPRTSPAE
DEDDLVPAEHKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQTKLLIL
HQAVSVILNLEQQVRERNLNPKAACLKRREEEKVSSVVGDPQMVLSAAHPGLGEAHNPAG
HM
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccgcagaggatggcgcccgtgggcaccgacaaggaactcagcgacctcctg
gacttcagtatgatgttcccgctgcctgtgcccaacgggaagggccggcctgctcccctg
gccactgcccagtttggaggctcagctctggaggaccggcccagctcgggctcctgggcc
cctggagaccagaatagctcctcgttcgacggcagccggacctacggagccggcgcccac
ttcagcgagccccccagcagcctcccttcatccacatttctgggccctgggctcagtggc
aagggtggcgagcggggcgtggcgtaccccgccttcgggagagacgcgggcgtcggcagc
ctgacccaggctggcttcctgcccggcgagctggccctcagcagccccagccccctgtcc
ccgtcggccgccaagggaggctccccgtattactcatcctacccccggcggagagccgcg
gacagcggtctggatgctcagcccaagaaggtccggaaggtgccgcctggcctgccctcc
tcggtgtacccgcctggctcaggtgatgatttcggcagggaccccgcctaccccgcggcc
aagacccccagcagcgcctaccccgcccccttctacatgccagatggcagcctgcacccc
tcagcggaactctggaaccccccgggccaggcgggcttcgggcccatgctgggcgggggg
tcgtcacccctgcccctgtctgctggcggcggcagcagctccgtggccggtggcggaggc
agcggtggcagctttgggggnnnnnnnnnnncctctccgcagggctacccgctgcacggc
gcggaggtgaacggcgcgctgccggccgtgtcgtccttctcgtccgggccccccgcctat
ggcagtgtctcgggccacacgccccccgtgagcgtcagtggcgcggacagcctcctgggc
tcccgagggaccacggccggcagctccggagacgccctggggaaggcgctggcctcgatc
tactctccggatcactcaagcaataacttctcctccagcccctccacgcccgtgggctcc
ccgccacagggcttggcagggacatcacagtggccccgcgctggagcccccggtgcctta
tcgcccaactatgacgggggtctgcacggcctggtaacattgcccctcccacagagcaag
ctggaggaccacctggatgaggctatccatgtgctgcgtagccacgccgtgggctcagcc
ggtgacctgcatgggctgctgcctgggcacgggccgctggcctctggcttcccaggccca
gtcctgcctctgtctgggcggcacacggggctggtggcaggtggtcacgcggaggacagc
ctctccggcactgccagcctcgcgcacaaccctgtcgccctgcccagccaacctagcgcc
ctgcctgacctcacccggccccctgactcgtacagcagcctggggcgcgcaggcggcgcg
gcggcgggcgagatcaagcgggaggagaaggaggacgaggagaacgggctggcggccgag
ccgtcggaggaggagaagaaggagctgaaggcgctgcggccccggaccagcccagccgag
gacgaggacgaccttgtccccgcagagcacaaggctgaacgggagaaggagcgccgggtg
gccaataacgcccgggagcggctgcgcgtgcgcgacatcaatgaggcttttaaggagctg
gggcgcatgtgccagctgcacctcaacagtgagaagccccagaccaaactgctcatcctg
caccaggccgtgtcggtcatcctcaacctggagcagcaggtgcgagagcggaacctgaac
cccaaagccgcctgcctgaagcgtcgggaggaggagaaagtgtccagcgtggtcggagac
ccccagatggtgctgtcggctgcgcacccgggcctgggggaggcccataaccccgccggg
cacatgtga
DBGET
integrated database retrieval system
