Sorex araneus (European shrew): 101540685
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Entry
101540685 CDS
T07854
Name
(RefSeq) protein C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04140
Autophagy - animal
sara05014
Amyotrophic lateral sclerosis
sara05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101540685
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101540685
05022 Pathways of neurodegeneration - multiple diseases
101540685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101540685
Membrane trafficking [BR:
sara04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
101540685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
101540685
NCBI-ProteinID:
XP_004600243
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIILEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVKTLCLFLTPTERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHVYNQRRYMRSELTAFWRATSEEDMAQETIIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLILHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctctgtccgccaccatcgccagctgttgccaagacagagattgctttaagt
ggtgaatctcctttattagcagccacctttgcgtactgggacaatattcttggtcctagg
gtcaggcacatttgggctccaaagactgaacaggtacttctcagcgatggagaaataaca
tttctggccaatcataccctcaatggagaaatcctccgaaatgcagagagtggggctata
gatgtaaagttttttgtcttgtctgaaaaaggagtcattattgtttcgttaatcttcgat
ggcaactggaatggggatagaagcacatatggactgtcaattatacttccacagacggaa
cttagcttctatctcccgcttcacagagtatgtgttgacaggttaacacatattatccgg
aaaggaaggatatggatgcataaggaaaggcaagaaaacgtccagaagattattttagaa
ggcacagagagaatggaggatcagggtcagagtattattccaatgcttaccggagaagta
attcctgtaatggaattgctttcatctatgaaatcacatagtgttcctgaagaaatagat
atagctgatacagtcctcaatgatgatgatattggtgacagctgtcatgaaggctttctt
ctcaatgccattagctcacacttgcaaacctgtggctgttctgtcgtcgtaggtagcagc
gcagagaaagtaaataagatagtgaaaacactatgcctttttctgactccaacagagaga
aaatgttccagattatgtgaagcggaatcatcatttaaatatgagtcaggactttttgta
caaggtctactaaaggactcaactggaagcttcgtcctgcccttccggcaagtcatgtac
gccccctatcccaccacacacatcgacgtggatgtcaacacagtcaagcagatgccgccc
tgtcacgagcacgtctataaccagcgcagatacatgagatcagagctgacggcgttctgg
agagccacgtcagaagaagacatggctcaggagacgatcatttacaccgacgaaagtttc
acgcctgatttgaatatatttcaagatgttttacacagagacactctagtaaaagccttc
ctggatcagatttttcatctgaagcctggattatctctcaggagtactttcctggcacaa
tttctacttatccttcacagaaaagccttgacgctaataaaatacatagaagatgatacg
cagaaggggaagaagccctttaaatctctgaggaacctgaagatagaccttgatttaaca
gcagagggcgatcttaacataataatggctctagctgagaagattaaacctggactacac
tcatttatctttggaagacctttctatactagtgtacaagagcgagatgttctgatgact
ttttaa
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integrated database retrieval system