Sorex araneus (European shrew): 101542462
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Entry
101542462 CDS
T07854
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101542462 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sara03400
]
101542462 (TDG)
Enzymes [BR:
sara01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
101542462 (TDG)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
101542462 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
101542462
NCBI-ProteinID:
XP_004602917
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MAEAPAPMVPREEPMPEEPAPAEAPLPAPAEEPMPEAPRGRKRKPRATQTKKPAEPKKKA
AEPKKPAEAKKSGKSKKSKDKQEKITDAFKVKRKVDRFNGVSEAELLTKTLPDILTFNLD
IVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMV
ERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFG
LQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIERNTDVQEVQY
TFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYTGNPCSSEPCSAPANGLMAPGGESALS
DIPNGQWVAPPFADQIPAFSTPCGTQEQEAGNLA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcgcctgcccccatggtaccgagggaagagccgatgcctgaggagccagcg
ccggccgaagccccgctgcccgccccggcggaggagcccatgccagaggccccaagagga
agaaaaaggaaacctagagcaacacaaaccaaaaagcccgcggaacccaaaaagaaggca
gcagaacccaaaaaacctgctgaggcaaaaaaatctggcaaatccaaaaaatcaaaagac
aagcaagaaaaaatcacagatgcgtttaaagtcaaaagaaaagtagaccgttttaatggc
gtttcagaagctgagcttttgacaaagactctccccgacattttgacgttcaatctggac
atcgtcattattggcataaaccccggactcatggctgcttacaaagggcatcattatcct
ggacctggaaaccatttttggaagtgtctgtttatgtcagggctgagtgaagttcagctg
aatcacatggacgaccacacgttaccggggaaatacggtattgggtttaccaatatggtg
gaaaggaccacgccaggcagcaaggatctttccagtaaagaattccgtgaaggaggacgt
atactcgtgcagaagttgcagaagtatcagccaagaatagcagtgtttaatggaaaatgt
atttatgaaatatttagtaaagaggttttcggagtcaaggtgaagaacttagagtttgga
cttcagccccataaaatcccagacacagaaactctctgctatgtcatgccgtcatccagc
gccagatgtgctcagttccctcgcgcccaggacaaagtgcattactacattaagttgaag
gacttaagagatcagctgaaaggcattgaacggaacacagacgttcaggaggtgcaatat
acattcgacttgcagctggcccaagaggatgcaaagaagatggctgttaaggaagagaag
tacgatccgggttacgaggccgcgtacggaggcgcgtacactggaaacccgtgcagcagt
gagccctgcagcgcccctgccaacgggctaatggctcccggtggagagtcggcgctgagt
gacattccaaatgggcagtgggtggccccgccgttcgcagaccagattcctgccttcagt
acgccgtgcggcacgcaagagcaagaggcgggaaacctggcctga
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