Sorex araneus (European shrew): 101544196
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Entry
101544196 CDS
T07854
Symbol
SLIT1
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 1 protein
KO
K06838
slit 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04360
Axon guidance
sara04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101544196 (SLIT1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101544196 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sara00536
]
101544196 (SLIT1)
Glycosaminoglycan binding proteins [BR:
sara00536
]
Heparan sulfate / Heparin
Axon guidance molecules
101544196 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
hEGF
LRRNT
LRRCT
LRR_1
EGF_TEN
LRR_9
LRR_14
EGF_3
EGF_DL_JAG
FNIP
EGF_Teneurin
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
101544196
NCBI-ProteinID:
XP_004616490
LinkDB
All DBs
Position
Unknown
AA seq
1518 aa
AA seq
DB search
MALTTRRGPSAGPLGSPQLWLLLWTAAWRLGATACPALCTCTGTTVDCHGAGLRAIPKNI
PRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRN
QLQVLPELLFQHNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNHISCIEEGAFRA
LRGLEVLTLNNNNVTSIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLF
TQCSGPAALRGLNVAEVQKSEFSCSGQGEAGRPPSCTLSSGSCPAMCTCSSGIVDCRGKG
LTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEMAPDAFQGLRSL
NSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS
LAKGTFTSLRAIQTLXFLRTNPVETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIP
GTEDYQLNSECTSDVVCPHKCRCENSVAECSSLRLTKIPERVPQATAELRLNNNEISILE
ATGMFKKLTHLKKINLSNNKLSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLR
TLMLRTNRISCIHNDSFTGLRNVRLLSLYDNQIVTIAPGAFDTLQALSTLNLLANPFNCD
CQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEEGQEEVGCLPRPQCPQ
ECACLDTVVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKI
SSLSNSSFTNMSQLTTLILSYNALQCIPALAFQGLRSLRLLSLHGNDISTLQEGIFADVT
SLSHLAIGANPLYCDCHLRWLSGWVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFDCQG
PPTLAVQAKCDPCLSSPCQNQGTCSNDPSEGYRCACPSGYKGRDCAVSLDSCASGPCENG
ATCHSQDGEGAAFTCSCPTGFEGPTCGVNTDDCVEHTCANGGTCVDGVGNYTCQCPQQYA
GRACEQLVDFCSAALNPCQHEARCVGTPDGPRCECAPGYAGDNCSENQDDCRGHRCQNGA
RCLDQVNGYSCLCAEGYSGQFCETPPGPPAPKSPCEGTECQNGARCVVQGSRPVCQCLPG
FGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGILLYNGDSDHMAVEL
YQGHVRVSYDPGSYPSSAIYSTETINDGQFHTVELVTFDQMVNLSIDGGSPLTMDNSGKH
YTLNSETPLYVGGMPVDVNSAAFRLWQILNGSSFHGCIRNLYINNELQDFTKTRMKPGVV
PGCEPCRKLYCLHGICQPNATPGPVCHCEAGWGGPHCDQPAAGPCHGHKCVHGKCVPLDA
LSYSCQCQDGYSGALCNQAGARADPCGGLQCLHGHCQASATQGPHCVCDPGFAGERCEQE
SACRGDPVRDFHQVQRGYAVCRTTRPLSWVQCRGGCPGHGCCQGLRQKRRKLTFECSDGT
SFAAEVEKPTRCGCAPCA
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaccacccggcggggaccctcggccgggccgctcggctcgccccagctctgg
ctgctgctgtggaccgccgcgtggcgcctgggggccacggcgtgccccgccctctgcacc
tgcaccggcaccacggtggactgtcacggcgcggggctccgcgccatccccaagaacatc
ccccggaacaccgagcgcctggaactcaacggcaacaatatcacccggatccacaagaat
gacttcgccgggctcaagcagctgcgcgtgctgcagctgatggagaaccagatcggcgtg
gtggaaaggggggcttttgatgacatgaaggaactggagcggctacggctgaaccggaac
cagctgcaggtgttaccagagctgctgttccagcataaccaggctctgtccagactggac
ttgagtgaaaacaccatccaggccatccccaggaaagctttccgcggagctacggacctc
aagaacctacagctggacaagaaccacatcagctgcatcgaggaaggcgccttccgggct
ctgcgcgggctggaggtgctgaccctgaacaacaacaacgtcacgtccatccccgtgtcc
agcttcaaccacatgcccaagctgcgcaccttccgcctgcactccaaccacctgttctgt
gactgccacctggcctggctctcccagtggctgcggcagcggcccaccattgggctcttc
acacagtgctcggggcctgctgccctgcgcggcctcaatgtggccgaggtccagaagagc
gagtttagctgctcagggcagggcgaggccgggcgcccgccgtcctgcaccctgtcctcc
ggctcctgcccggccatgtgcacgtgcagcagcggcatcgtggactgccgtgggaagggc
ctcaccgccatccccgccaacctgcccgagaccatgacggagatccgcctggaactcaac
gggatcaagtccatcccacctggagccttctctccctacaggaagctgcggcggatagac
ctgagcaacaaccagatctcagagatggcgcctgacgccttccagggcctccgctccctg
aactcgctggtcctctatggaaacaagatcacagacttgccccggggcgtgtttggcggc
ctgtacaccttacagctcctgcttttaaatgccaacaagatcaactgcatccggcccgat
gccttccaggacctgcagaacctctctctgctctccctgtacgacaacaagatccagagt
ctggccaagggcacctttacctccctgagggccatccagaccctgtgattcctgcgcacc
aaccccgtggagacgagcggggcgcgctgcgccagcccccggcgcctggccaacaagcgc
atcgggcagatcaagagcaagaagttccgctgctcagccaaagagcagtacttcatccca
ggcacagaggattaccagctgaacagcgagtgcaccagcgacgtggtttgtccccacaag
tgccgctgcgagaacagcgtggccgagtgctccagcctgaggctgaccaagatccccgag
cgcgtcccccaggccacggccgagctacgattaaacaacaatgagatttccatcctggag
gccactgggatgtttaaaaaactaacacatctaaagaaaatcaacctgagcaacaacaag
ctgtcggaaatcgaggacggggcctttgagggcgcggcgtccgtgagcgagctgcacctg
accgccaaccagctggagtccatccggagcggcatgttccggggcctggacggcctgaga
acgctgatgctgaggaccaaccgcatcagctgcatccacaacgacagcttcaccggcctg
cgcaacgtgcggcttctctcactctacgacaaccagatcgtcaccatcgccccgggcgcc
ttcgacaccctgcaggccctctccacgctaaacctcctggccaaccctttcaactgcgac
tgccagctggcctggctgggcgactggctgcgcaagaggaagatcgtgaccgggaacccg
cgatgccagaaccccgacttcctgcggcagatccccctgcaggacgtggccttccccgac
ttcaggtgtgaggaaggccaggaggaggtgggctgcctgccccggccgcagtgcccccag
gaatgtgcctgtctggacaccgtggtccgatgcagcaacaagcacctccaggccctgccc
aagggcatccccaagaacgtcaccgagctctacctggatgggaaccagttcaccctggtt
ccaggacagctgtccaccttcaagtacctgcagctcgtggatctgagtaacaacaagatc
agttccttgagcaactcctccttcaccaacatgagccagctgaccaccttgatcctcagc
tacaacgcgctccagtgcatccctgcgctggccttccaggggctgcgctccctgcgcctg
ctgtccctgcatggcaatgacatctccaccctccaagagggcatcttcgccgacgtgacc
tccctgtctcacctggctattggtgccaaccccctatactgtgactgccacctccgctgg
ctctctggctgggtgaagacgggctacaaggagccgggcattgctcgctgcgctggaccc
ccggacatggagggcaaactgctcctcaccacgcctgccaaaaagtttgactgccaaggt
ccccccaccctggctgtccaggccaagtgtgacccctgcttgtccagtccatgtcagaac
cagggcacctgttctaatgacccttcggaggggtacaggtgtgcctgccccagcggctac
aagggccgggactgtgcggtgtccctggatagctgtgcgagtggcccctgcgagaatggg
gcgacctgccactctcaggacggcgagggcgcagccttcacgtgctcctgccccactggc
tttgaagggcccacctgcggggtgaacacggatgactgtgtggagcacacatgtgccaac
gggggcacctgtgtggacggtgtgggcaactacacctgccagtgcccccagcagtatgcg
ggacgggcctgcgagcagctggtggacttctgctccgcagctctgaacccatgtcagcat
gaggcccggtgtgtgggcaccccagacgggccccggtgtgagtgtgcccctggctatgca
ggggacaactgcagcgagaaccaggatgactgtcggggccaccgctgccagaacggggcc
cggtgtttggaccaagtcaacggctactcgtgcctctgtgccgagggttacagtgggcag
ttctgtgagacccctccaggcccgcctgcccccaagagcccgtgcgaggggaccgagtgc
cagaacggggcccgctgcgtggtgcagggcagccggcccgtgtgccagtgtctcccaggc
tttggggggcctgagtgcgagaagttgctcagtgtcaactttgtggatcgggacacgtac
ctgcagttcacggacctgcagaactggccacgggccaacatcacgctgcaggtgtccacg
gccgaggacaacgggatcctgctgtacaacggggacagcgaccacatggcggtggagctg
taccagggccatgtgcgcgtcagctacgacccgggcagctaccccagctctgccatctac
agtaccgagaccatcaatgacgggcagttccacaccgtcgagctggtcaccttcgaccag
atggtgaacctgtccatcgacggcggcagcccgctgaccatggacaactccggcaaacac
tacacgctcaacagcgagacgcccctctatgtgggagggatgcctgtggacgtaaactcg
gccgccttccgcctgtggcaaatcctcaacggcagcagcttccacggctgcatccgcaac
ctgtacatcaacaatgagctgcaggacttcaccaagacgcgcatgaagccgggcgtggtg
ccgggctgcgagccctgccggaagctgtactgcctgcacggcatctgccagcccaacgcc
acccccgggcccgtgtgccactgcgaggctggctgggggggcccgcactgcgaccagcct
gccgccgggccctgccacggccacaagtgtgtccacgggaagtgcgtgcccctcgacgcc
ctttcctacagctgccagtgccaggatgggtactcgggtgccctgtgcaaccaggccggg
gcccgcgccgacccgtgtggggggctgcagtgcctgcacggccactgccaggcctcagcc
acccaggggccacactgtgtgtgtgatcccggctttgcgggcgagcggtgcgagcaagag
tccgcgtgccggggggaccccgtccgggactttcaccaggtgcagaggggctatgccgtc
tgccggaccacgcggccgctgtcgtgggtgcagtgccggggcgggtgcccgggccacggc
tgctgccaggggctgcggcagaagcgcaggaagttgacctttgagtgcagcgacgggacc
tcctttgcggccgaggtggagaagcccaccaggtgcggctgcgccccctgcgcctag
DBGET
integrated database retrieval system
