Sorex araneus (European shrew): 101546902
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Entry
101546902 CDS
T07854
Symbol
PCDHGC5
Name
(RefSeq) protocadherin gamma-C5
KO
K16497
protocadherin gamma subfamily C
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sara04515
]
101546902 (PCDHGC5)
Cell adhesion molecules [BR:
sara04515
]
Cadherins
Protocadherins
101546902 (PCDHGC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
101546902
NCBI-ProteinID:
XP_012788772
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MGPKTPTELSGKWQVLCMLSLCCWGWVSGQLHYSVVEESEPGTLVGNVAQDLGLKVTDLL
SRRLRLGSEENEHYFSLSLMSGALTVNQKIDRESLCGASTSCLLPVQVVTEHPLELIRVE
VEILDLNDNSPSFATPEREIRISESAAVGARFPLDSAQDPDVGTNTVSFYTLSPSSHFSL
HVKTLKDGKLFPELVLEQQLDREAQARHQLVLTAVDGGIPARSGTTLISVIVLDINDNAP
TFQSSVIRVGLPENAPIGTLLLRLNASDADEGTNGQLDYSFGDHTSEAVRNLFGLDPISG
AIHVLGLIDFEESSFYEIHARVRDQGQPAMEGHCVIQVDVGDVNDNAPEVLLTSLVNPVL
ENTAVGTVVGLFNVRDRDSGRNGEVSLSISPDLPFQIKPSENHYSLITSQPLDREVRPHY
IIELLASDAGSPPLQTQLTIKLNISDVNDNTPYFSQQLYTAYISENRPPGSLLCTVAASD
PDIGDNARLIYSIVGNQIQGAPASSFVYVNPEDGRVFAQRTFDYELLQMLQIVVGVRDSG
SPPLHANTSLHLFVLDQNDNAPTVLHPRPGQELSAPQRLPRSTPPGSLVTKVTAVDADAG
HNAWLSYSLLPQSTTPGLFLVSAHTGEVRTARALLEEDADTQQVVVLVRDNGDPSLSSTA
TVLLVLEDEDPEEMPKSSDFLTHTPERSDLTLYLIVALATVSLLSLVTFTFLSAKCLMGQ
ASGDGGGGQCCGRQESPSREFYKQSGPNLQVSSDGTLKYMEVTLRPTDSQSHCYRTCFSQ
ASDGSDFTFLRPLSVQQPATAALEPDAYRSRANTLREPSQQAPPNTDWRFSQGQRPGTSG
DVVVDWGLGHRSHEKEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA
TLTSAAGKRDGKTPAGGNGNKKKSGKKEKK
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggggcccaagacacccacagagctctctgggaaatggcaagtgctatgcatgttgtcc
ttgtgctgctggggctgggtgtctgggcagcttcattactcagtggtggaggagtctgag
cctgggactctggtgggaaatgttgctcaggatctaggcttaaaggtgacagatctgttg
agccgccgactgcggttgggctctgaggagaatgagcactatttttctctgagcttgatg
agtggtgctctgacagtgaatcaaaagattgaccgagagagcttgtgtggagccagcacc
agctgcctgctgccagttcaggtggtgactgaacaccccttggaattaattcgtgtagag
gtagagatcctggatcttaatgacaactctcctagctttgccactcctgaacgagagata
cgcatctcagaatcagcagcagttggagcaaggtttccactggatagtgcccaggatcca
gacgtgggcaccaataccgtgagcttctatactttaagccccagtagccacttctctctg
catgtgaaaaccctaaaagatggaaaactgtttcctgaactggtgctagagcagcagctg
gatcgtgaagcgcaggcaagacatcagctagtgcttactgctgtggatgggggtatccca
gcccgctcaggcaccaccttaatctctgtcatcgtgctggatatcaatgataatgctcca
accttccagtcctcagttatacgtgtgggacttccagagaatgcacccataggtacattg
ctgctccgcctcaatgccagtgacgcagatgagggcaccaatggccaactagactattct
tttggagaccatacatctgaggcagtgcgcaatctctttggcctagatcctattagtgga
gccatccatgtgttaggtctcatagactttgaggaatcaagtttctatgaaattcatgca
agagtccgggaccagggacagccagcgatggaaggccactgtgtgattcaagtggatgtg
ggggacgtcaatgataatgccccagaggtactactgacctctttggtgaatcctgtgctg
gagaacacagcagtgggcacagtagtgggattgttcaatgtgcgtgaccgagattcaggg
agaaacggtgaagtaagcctgagtatctctccagatctgccatttcagattaagccttct
gagaaccactactcactgataactagtcagcccttggatcgtgaggtcagaccacactat
ataatcgagctactggccagtgatgcaggctcacctcccctgcaaactcagctcaccatc
aagctcaacatttcagatgttaacgacaatacaccctacttcagtcagcagctttacact
gcttatatttcagaaaaccggcctccaggctcccttctctgcactgtggctgcctcagat
ccagatattggggataatgcccgcctcatctactccattgtagggaatcagatccaggga
gccccagcctcctcctttgtttacgtcaaccctgaggatgggcgtgtctttgcccagcga
acctttgactatgaactgctgcagatgctgcagatcgtagtgggggttcgagactctggc
tctcccccattgcatgccaacacatctctgcacctgtttgtcctggaccagaatgataat
gcccccacagtgctgcatccaagaccaggccaggaactctcagccccccagcgtctccct
cgctctactcctcctggctccttggtcaccaaagtgacagctgtagatgctgatgcaggc
cacaatgcgtggctctcctactcactattgccccagtccacgacgccagggctgttcctg
gtatctgctcatactggggaagtacgcacagccagggccttactagaggaggatgctgac
acccagcaggtggtggtcttggtgagggacaatggtgacccatccctctcttccacagcc
acagtactgctggttctggaggatgaagacccagaggaaatgcccaaatccagcgacttc
ctcacacacaccccggagcgttcagaccttaccctttatctcattgtggctctggcaacc
gtcagtctcttatccttagtcacctttacctttctgtcagctaagtgccttatggggcaa
gccagtggggacgggggtgggggccagtgctgcgggcgccaggagtcaccctccagggag
ttctataagcagtcgggccccaacctgcaggtgagctcggacggcacgctaaagtacatg
gaggtgacgctgcggcccacggactcgcagagccattgctacaggacgtgcttttcacaa
gcctcggacggcagtgacttcactttcctcaggccgctcagcgtccagcagcccgccacc
gcggcgctggagcctgacgcctacaggtcccgcgctaacaccctgagggagccgagccag
caagccccgcccaacacggactggcgtttctcgcaagggcagagacccggcaccagcggg
gatgttgttgtagattggggtctgggacacagatcccatgaaaaagaagccgctgatggg
agctccacccttggagggggggctggcaccatgggcctgagcgcccgctatgggccccag
ttcaccctgcagcatgtgcccgactaccgccagaatgtctacatccctggcagcaatgcc
acactgaccagcgcggctggcaagcgggatggcaagaccccggcaggcggcaacggcaac
aagaagaagtcaggcaagaaggaaaagaagtaa
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