Sorex araneus (European shrew): 101546922
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Entry
101546922 CDS
T07854
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sara04040
]
101546922 (SCN4A)
Ion channels [BR:
sara04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101546922 (SCN4A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
101546922
NCBI-ProteinID:
XP_004618022
LinkDB
All DBs
Position
Unknown
AA seq
1834 aa
AA seq
DB search
MASASLPTLLPLGPESLRPFTPESLAAIEQRAQEEEARQLRNKQMEIEEPERKPRSDLEA
GKSLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKSIFRFSATPALYLLSPFSIV
RRCAIKVLIHSLFSMFIMITILTNCVFMTMSDPPSWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNSTGLGNDTW
LDMAGLSNDTWFINDTWFANDTWFANDTWASNDTWAGRESWASNSTFDWDAYINDEGNYY
FLEGSNDALLCGNSSDAGRCPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWE
NLFQLTLRAAGKTYMVFFVVIIFLGSFYLINLILAVVAMAYEEQNEATLAENQEKEEEFQ
QMLEKYKKHQEEVEKAKAAQALEGGDADGDPAHSKDCNGSVDAAPGEQDSGISDAMEELE
EAHQKCPPWWYKCSQKVLIWNCCAPWVQFKHIIHLIVMDPFVDLGITICIVLNTLFMAME
HYPMTEHFDHVLYVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELG
LANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKIASDCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQPMC
LTVFLMVMVIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGISFAKA
FLLGLLHGQVLRPKDIILRIGKLGEVAAADADTAGDGAPEDEKKEPLPADGEQDVKKDNH
ILNHVGLADGAPPGVELDHLNFINNPYLTIHVPIASEESDLDLPTEEETDTFSEPEDIKK
LPQHPCDGTSSVGSTADYKPPEEDPVEQAEEHPEEEPEECFTEACVQRWPCLSVDISQGR
GKQWWTLRRACFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFT
YIFIIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTT
TSERFDISEVNNKSQCESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAA
VDSREQEEQPQYEVNIYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKMRKDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDFVTKQVFDITIMILICLNMVTMMVET
DDQSQLKVDILYYINMVFIIVFTGECVLKMFALRHYYFTVGWNIFDFVVVILSIVGLALS
DLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMF
IYSIFGMSNFAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCD
PTLENPGSSVRGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESTEPLCE
DDFEMFYETWEKFDPDATQFIAYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKI
HCLDILFALTKEVLGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIRI
QRAFRRHLLRRSVKQASYLSRHSLDGSGPGAPEKEGLIAESMNRMYGPEGDTSGTVQSPA
AEDRGASEDAGPAAPPPPAPPAQTVRPGVKESLV
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgcgtctctgcccaccctgctgccgctgggccccgagagcctgcgccccttc
actccggagtccctggcggccatagagcagcgggcgcaggaggaggaagcccggcagctg
cggaacaagcagatggagatcgaggagcccgagcggaagcctcgcagtgacctggaggcg
ggcaagagcctgcccctgatctacggggaccccccgcccgaggtcatcggcatccccttg
gaggacctggacccctactacagcgacaagaagaccttcatcgtgctcaacaagggcaag
tccatcttccgcttctcggccacgcccgcgctctacctgctgagccccttcagcatcgtc
cggcgctgcgccatcaaggtgctcatccactcgctgttcagcatgttcatcatgatcacc
atcctgaccaactgcgtgttcatgaccatgagtgacccgccgtcctggtccaaggacgtg
gagtataccttcacgggcatctacacctttgagtccctcatcaagatgctggcccgtggc
ttctgcatcgacgatttcacattcctccgggacccctggaactggctggacttcagcgtc
atcatgatggcctacctcaccgagtttgtggatttgggaaacatatcagccctgagaacc
ttccgggtgctgcgagccctgaaaaccatcacggtcatcccagggctgaagacgatcgtg
ggggccttgatccagtcggtgaagaagctgtcggacgtgatgatcctcaccgtcttctgc
ctgagcgtcttcgcgctggtggggctgcagctcttcatggggaacctgcggcagaagtgc
gtgcgctggcccccgcctttcaacgacaccaactccaccgggctgggcaacgacacctgg
ctggacatggcggggctcagcaacgacacctggttcatcaacgacacctggttcgccaac
gacacctggttcgccaacgacacctgggccagcaacgacacctgggccggccgcgagagc
tgggccagcaactccacctttgactgggacgcgtacatcaacgacgaagggaactactac
ttcctggagggctccaacgatgccctgctctgtgggaacagcagcgacgctgggcgctgc
cccgaggggtacgagtgcatgaaggccgggcggaaccccaactacggctacacgagctac
gacaccttcagctgggccttcctggccctcttccgcctcatgacgcaggactactgggag
aacctcttccagctgaccctgcgagcagccggcaagacctacatggtcttcttcgtggtc
atcatcttcctgggctccttctacctcatcaacttgatcctggcggtcgtggccatggcg
tacgaggagcagaacgaggccacgctggccgagaaccaggagaaggaggaggagtttcag
cagatgctggagaagtacaaaaagcatcaggaggaggtggagaaggccaaggccgcccag
gctctggaaggcggagacgcggacggggaccctgcccacagcaaagactgcaacggcagc
gtggacgcggcgccgggagagcaggacagcggcatctcagacgcgatggaagagctggaa
gaggcccaccagaagtgcccgccgtggtggtacaagtgctcgcagaaggtgctcatctgg
aactgctgcgccccgtgggtgcagttcaagcacatcatccacctcatcgtcatggaccct
ttcgtggacctgggcatcaccatctgcatcgtgctcaacaccctcttcatggccatggag
cactaccccatgaccgagcacttcgaccacgtgctctacgtcggcaacctggtcttcacg
ggcatcttcaccgccgagatggtgctgaagctcatcgccatggacccttacgagtacttc
cagcaaggctggaacatcttcgacagcttcatcgtcaccctcagcctggtggagctgggc
ctggccaacgtgcaggggctgtccgtgctccgctccttccgcctgcttcgggtcttcaag
ctggccaagtcgtggccgaccctgaacatgctcatcaagatcatcggcaactcggtgggc
gccctgggcaacctgacgctggtgctggccatcatcgtgttcatcttcgccgtggtgggc
atgcagctgttcggcaagagctacaaggagtgtgtgtgcaagatcgcctccgactgcagc
ctgccccgctggcacatgcacgacttcttccactccttcctcatcgtcttccgcatcctg
tgcggcgagtggatcgagaccatgtgggactgcatggaggtggccggccagcccatgtgt
ctcacggtcttcctcatggtcatggtcatcggcaacctggtggtcctgaacctgttcctg
gcgctgctcctgagctccttcagcgccgacagcctggcggcctcggacgaggacggggag
atgaacaacctgcagatcgccatcgggcgcatcaagtggggcatcagcttcgccaaggcc
ttcctgctgggcctgctgcacgggcaggtcctacggcccaaggacatcatcctgcgcatc
gggaagctcggggaggtggccgccgccgacgccgacaccgccggggacggcgcccccgag
gacgagaagaaggagccactgccggccgacggggagcaggacgtgaagaaggacaaccat
atcctgaaccacgtgggcctggccgacggcgcgccccccggcgtcgagctggaccacctc
aacttcatcaacaacccctacctcaccatccacgtgcccatcgcctccgaggagtcggac
ctggacctgcccaccgaggaggagaccgacaccttctcggagcctgaggacatcaagaag
ttgccgcagcacccctgcgacgggacctcctccgtgggcagcacggccgactacaagccc
cccgaggaggaccctgtggagcaggccgaggagcaccccgaggaggagcctgaagagtgt
ttcaccgaggcctgtgtgcagcgctggccgtgcctgtccgtggacatctcccagggccgg
gggaagcagtggtggacgctccgccgggcctgcttccgcatcgtcgagcacaactggttc
gagaccttcatcgtcttcatgatcctgctcagcagcggagccctggccttcgaggacatc
tacattgagcagcggcgcgtgatccgcacgatcctggagtacgcggacaaggtgttcacc
tacatcttcatcatcgagatgctgctcaagtgggtggcctacggcttcaaggtctacttc
accaacgcctggtgctggctcgacttcctgatcgtcgacgtctccatcatcagcctggtg
gccaactggctgggctactcggagctggggcccatcaaatccctgcggacactgcgggcg
ctgcgccccctcagggcactgtcgcgattcgagggcatgagggtggtggtgaacgccctc
ctgggcgccatcccgtccatcatgaacgtgctgctcgtctgcctcatcttctggctcatc
ttcagcatcatgggcgtgaacctgttcgccggcaagttctactattgcatcaacaccacc
acgtccgagaggttcgacatctccgaggtcaacaacaagtcccagtgcgagagcctcatg
cacacgggccaggtccgctggctcaacgtcaaggtcaactacgacaacgtgggcctgggc
tacctctccctcctgcaggtggctacattcaagggctggatggacatcatgtacgcggcc
gtggactcgcgagagcaggaggagcagccgcagtacgaggtgaacatctacatgtacctg
tacttcgtcatcttcatcatcttcggatctttcttcaccctcaacctcttcatcggcgtc
atcattgacaatttcaaccagcagaagaagaagatgaggaaagacatcttcatgacggag
gagcagaagaagtactacaatgccatgaagaagctgggctccaagaagccacagaagccc
atcccgcggcctcagaacaagatccagggcatggtgtacgacttcgtcaccaagcaggtg
ttcgacatcaccatcatgatcctcatctgcctcaacatggtcaccatgatggtggagacg
gacgaccagagccagctgaaggtggacatcctgtactacatcaacatggtcttcatcatc
gtcttcaccggcgagtgcgtgctcaagatgttcgcgctgcgccactactacttcaccgtc
ggctggaacatctttgacttcgtggtggtcatcctgtccatcgtgggcctcgcactgtcc
gacctgatccagaagtacttcgtgtcgcccacgctgttccgcgtgatccgcctggcacgt
atcggccgcgtcctgcggctcatccgcggcgccaagggcatccgcacgctgctcttcgcc
ctcatgatgtccctgcccgcgctcttcaacatcgggctgctgctcttcctcgtcatgttc
atctactccatcttcggcatgtccaacttcgcctacgtcaagaaggagtcgggcatcgac
gacatgttcaacttcgagaccttcggcaacagcatcatctgcctcttcgagatcaccacg
tcggccggctgggacgggctcctgaaccccatcctcaacagcgggccgcccgactgcgac
cccacgctggagaacccgggctcaagcgtgcgcggggactgcggcaacccgtccatcggc
atctgcttcttctgcagctacatcatcatctccttcctcatcgtggtcaacatgtacatc
gccatcatcctggagaacttcaacgtggccacggaggagagcacggagccgctgtgcgag
gacgacttcgagatgttctacgagacgtgggagaagttcgaccccgacgccacgcagttc
atcgcctacagccgcctctcggacttcgtggacacgctgcaggagccgctgcgcatcgcc
aagcccaacaagatcaagctcatcacgctggacctgcccatggtgcccggggacaagatc
cactgcctggacatcctcttcgccctgaccaaggaggtcctgggcgactcgggggagatg
gacgccctcaagcagaccatggaggagaagttcatggccgccaacccctccaaggtctcc
tacgagcccatcaccaccaccctcaagaggaagcacgaggaggtgtgcgccatccgcatc
cagagggccttccgccgccacctgctccgccgctccgtcaagcaggcctcctacctgtcg
cgccacagcctggacggcagcgggcccggggcccccgagaaggagggcctcatcgccgag
tccatgaacaggatgtacggccccgagggcgacaccagcggcaccgtgcagagcccggcg
gccgaggacaggggcgcctcggaggacgctgggcctgccgccccccctccacccgcaccc
ccggctcagacggtgcgtcccggggtcaaggagtctctggtctag
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integrated database retrieval system
