Sorex araneus (European shrew): 101547111
Help
Entry
101547111 CDS
T07854
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101547111 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sara03041
]
101547111 (EFTUD2)
Spliceosome [BR:
sara03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101547111 (EFTUD2)
Complex C
U5 SnRNP specific factors
101547111 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
101547111
NCBI-ProteinID:
XP_004621067
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDEEDEDVGDHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacctgtatgatgagtttgggaattatatcggaccagagcttgactcagat
gaagatgatgacgaactgggcagagagaccaaagatcttgatgagatggatgacgacgag
gaggacgaggatgtcggcgatcacgacgacgaccacccgggcatggaggtggtgctgcac
gaggacaagaagtactaccccacagcagaggaggtgtacgggcccgaggtggagaccata
gttcaggaggaagacacgcagcctctgacagaacctattattaagccggtgaaaaccaag
aaattcaccctgatggagcagacgttacctgtcacggtgtatgaaatggatttcttggct
gatttgatggataactcagagctcatcagaaatgtcaccctttgtgggcacctccaccac
ggcaagacgtgcttcgttgattgtctgatagagcagactcacccagaaatcaggaagcgc
tacgaccaagatctctgctacactgacatcctgttcacagagcaggagaggggcgtgggc
atcaagagcaccccggtgaccgtggtcttgcctgacaccaaagggaagtcgtacctcttc
aacatcatggacacaccaggacatgtgaatttttctgatgaggtcacagccggcttgcgc
atctcggatggggtggtcctcttcatcgacgctgcggagggggtgatgctgaacacggag
cggctgatcaagcacgccgtgcaggagcggctggccgtcaccgtgtgcatcaacaagatc
gaccggctgatcctggagctgaagctgccgcccacggacgcgtactacaagctgcgccac
atcgtcgacgaggtcaacgggctgatcagcatgtactccacggacgagaatctgatcctg
tccccgctcctgggcaatgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctatgctgacaccttcggtgatattaactaccaggagtttgct
aaaagactctggggtgacatctacttcaatcccaagacgcgaaagttcaccaagaaggcc
ccgaccagcagctcccagaggagcttcgtggagtttatcttggagcctctgtataagatc
ctggcccaggtggtgggcgacgtggacaccagcctcccaaggaccctggatgaactcggc
atccacctgaccaaggaggagctgaagctaaacatccgcccccttctcaggctggtgtgc
aagaagttcttcggagagttcacaggctttgtggacatgtgtgtgcagcacatcccctct
ccgaaggtgggcgccaagcccaagattgagcacacctacacgggtggcgtggactccgac
ctcggcgaggccatgagcgactgtgaccccgacgggcccctcatgtgccacaccacgaag
atgtacagcaccgacgatggggtccagtttcatgcctttggccgggtgctcagcggcacc
atccatgccgggcagccggtgaaggtgctgggggagaattacaccctggaggacgaggag
gactcgcagatctgcactgtgggccgcctgtggatctccgtggccaggtaccacattgag
gtgaaccgagtccctgccggcaactgggttctgatagaaggcgtggatcaacccatcgtc
aagacggcgaccatcaccgagccccgaggcaatgaggaggctcagattttccggcccttg
aagttcaacaccacgtccgtcatcaagatcgccgtggagccggtcaacccgtccgagctc
cccaagatgctggatggcctgcgcaaggtcaacaagagctacccgtccctcaccacgaag
gtggaagagtctggcgagcacgtgatcctgggcacgggcgagctctacctggactgcgtg
atgcacgacctgcgcaagatgtactcggagatagacatcaaggtggccgaccccgtggtc
acgttttgtgagacggtggtggaaacgtcctccctcaagtgctttgccgagacgcccaac
aagaagaacaagatcaccatgatcgcagagcccctcgagaagggcctggccgaggacatc
gagaacgaggtggtgcagataacatggaaccggaagaagctgggagagtttttccaaacc
aagtacgattgggatctgctggctgcccgttccatctgggcttttgggcctgatgccacc
ggccccaacatcctggtggacgataccctgccctctgaggtggacaaggctcttcttggc
tcggtgaaggacagcatcgttcaagggttccagtggggaaccagagagggtcccctgtgc
gatgagttgatccgaaacgtcaaatttaagatcctggatgccgtggtggcccaggagccc
ctgcaccggggcgggggccagatcatccccacggcccggagagtcgtctactcggccttc
ctcatggccacgccgcgtctgatggagccctactactttgtggaggtgcaggcccctgcg
gactgcgtgtctgccgtctacactgtcctggccaggcgcaggggccacgtgacacaggat
gcgcccatccctggctcccccctctacaccatcaaagccttcatccccgccattgactct
ttcggcttcgagacggatctgcggactcacacccagggccaggccttttccctgtctgtc
ttccaccactggcagatcgtccctggtgatcctctggacaagagcattgtgatccggccc
ctggagccccagccggccccccacctggctcgggaattcatgatcaaaacccggcggcgg
aagggcctgagtgaagatgtgagcatcagcaagttcttcgacgaccctatgctgctggag
ctcgccaagcaggatgtcgtgctcaactaccccatgtga
DBGET
integrated database retrieval system
