Sorex araneus (European shrew): 101549465 Help Entry 101549465         CDS       T07854                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism sara  Sorex araneus (European shrew) Pathway sara04015   Rap1 signaling pathway sara04115   p53 signaling pathway sara04145   Phagosome sara04148   Efferocytosis sara04151   PI3K-Akt signaling pathway sara04350   TGF-beta signaling pathway sara04510   Focal adhesion sara04512   ECM-receptor interaction sara04820   Cytoskeleton in muscle cells sara05144   Malaria sara05165   Human papillomavirus infection sara05205   Proteoglycans in cancer sara05206   MicroRNAs in cancer sara05219   Bladder cancer Brite KEGG Orthology (KO) [BR:sara00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     101549465 (THBS1)    04350 TGF-beta signaling pathway     101549465 (THBS1)    04151 PI3K-Akt signaling pathway     101549465 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101549465 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     101549465 (THBS1)    04148 Efferocytosis     101549465 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     101549465 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     101549465 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101549465 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     101549465 (THBS1)    05205 Proteoglycans in cancer     101549465 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     101549465 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     101549465 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     101549465 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sara04131]     101549465 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sara00536]     101549465 (THBS1) Membrane trafficking [BR:sara04131]  Endocytosis   Phagocytosis    Opsonins     101549465 (THBS1) Glycosaminoglycan binding proteins [BR:sara00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101549465 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 Laminin_G_3 EGF_CA cEGF Laminin_G_2 TSP1_ADAMTS TSP1_CCN EGF Laminin_G_1 Motif Other DBs NCBI-GeneID:  101549465 NCBI-ProteinID:  XP_004609618 LinkDB All DBs Position Unknown AA seq 1166 aa AA seqDB search MGLTWALGVLFLWHVCGSNHIPESGADNSVFDIFELTGAARKASGRRLVKGPDPSSPAFR IENANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLALERKDGAGQLFSVV SNGKAGTLDLSLNVQGKQRVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMESAELD VPIQRIFTRDLASIARLRIAKGDVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTSPVL TLDNNVVNGSSPAIRTDYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVNTLQDSIRK VSEENKQLRRSPHCYHNGVQYKNHEEWTVDSCTECHCQDSVTICKKVSCPIMPCSNATVP DGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQTRTCH LQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARETKAC KKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPPPQFGGKDCIGDVTENQICNKQ DCPIDGCLSNPCFAGTKCTSYPDGSWKCGACPAGYSGNGIQCRDVDECKEVPDACFNHNE EHRCENTDPGYNCLPCPPRFSGPQPFGRGVEHATANKQVCKPRNPCTDGTHDCNKNAKCN YLGHYSDPMFRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPNLPNS GQEDYDKDGIGDACDDDDDNDRVPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYNHNPD QADTDKNGEGDACAVDIDGDGILNERDNCRYVYNVDQRDTDMDGVGDQCDNCPLEHNPDQ LDSDSDLIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGIP DDKDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICPENVDISETDFRRFQMIP LDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDDDYAG FVFGYQSSSRFYVVMWKQITQTYWDTHPTKAQGYSGLSVKVVNSTTGPGEHLRNALWHTG NTPGQVRTLWHDPRNIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYDKTYA GGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3501 nt NT seq  +upstreamnt  +downstreamnt atggggctgacctgggcacttggtgtcctattcctgtggcacgtgtgtggctccaaccac attccagagtccggcgcagacaacagcgtgtttgacatctttgaactcactggggctgcc cgcaaggcttctgggcgccggctggtgaagggccccgatccttccagcccggctttccgc atcgaaaatgccaacctgatcccccccgtacctgacgacaagttccaagacctggtagac gctgtgcgggcggagaagggcttcctcctcctggcctccctgcggcagatgaagaagacc cgcgggacgctgctggccctggagcgcaaagacggggcgggccaactcttcagcgtggtc tccaacggcaaggcgggcaccctggacctcagcctgaacgtgcagggcaagcagcgtgtg gtgtccgtggaggaagctctcctggccacgggccagtggaagagcatcaccctgttcgtt caggaggacagggcccagctctacatcgactgcgagaagatggagagtgcggagcttgat gttcccatccagaggatcttcaccagggacctggccagcatcgccaggctgcgcattgca aagggagatgtcaatgacaacttccagggagtgctgcagaatgttcggtttgtctttgga accacgccagaagatatcctcaggaacaaaggctgttccagctctaccagtcctgtcctt accctcgacaataatgtggtgaatgggtccagtcctgccatccgcaccgactacattggc cataagaccaaggatctgcaggccatctgtggcatctcttgtgacgagctgtctagcatg gtcctggagctccggggcctacgcactattgtcaacacacttcaggacagcatccgcaaa gtgtctgaagagaacaagcagctgaggaggtccccgcactgctaccacaacggagtccag tacaagaaccacgaggagtggacagttgacagctgcacagagtgtcactgtcaggactca gttactatctgcaaaaaggtctcctgccccattatgccctgctccaatgccactgttcct gatggagaatgctgcccacggtgttggcccagtgactcagcagatgatggctggtcccca tggtctgagtggacctcctgctcggtgacatgtggcaatggaatccagcagcgtggccgc tcctgcgacagcctcaacaaccgatgcgagggttcctctgtccagactcggacctgccac cttcaggagtgtgataagagatttaaacaggatggcggctggagccactggtccccctgg tcctcatgctctgtgacctgtggtgatggggtgatcaccaggatccggctctgcaactct cccagtccccagatgaacggcaaaccatgtgaaggcgaagctcgggagaccaaagcctgc aagaaagatgcctgccccataaatggaggctggggtccctggtccccatgggacatctgt tctgtcacctgtggaggaggagtgcagaaacgtagcaggctctgcaacaaccccccaccc cagtttggaggcaaggactgcattggggatgtgacagagaaccagatctgcaacaagcaa gactgtccaatcgatgggtgtctgtccaacccctgctttgccggcaccaagtgtaccagc taccctgatggcagctggaaatgcggtgcgtgccccgcaggttacagtgggaatggaatc cagtgcagagacgtggatgagtgcaaagaagtgccagatgcctgcttcaaccacaacgaa gagcacaggtgtgagaacacagaccccggctacaactgcctgccctgcccgccacgcttc tctgggccccagcccttcggccgcggtgtggaacatgccactgctaacaaacaggtgtgc aagcctcgcaacccctgcacagacggcacccatgactgcaacaagaatgccaagtgcaac tacttgggccactacagtgaccctatgttccgctgcgagtgcaagcctggctacgcgggc aacggcatcatctgcggagaggacacagacctggatggctggcccaacgaggacctggtg tgcgtggccaacgccacctaccactgcaaaaaggataactgccccaaccttcccaactca ggacaggaggactatgacaaagatggaatcggcgatgcctgtgatgacgatgatgacaat gacagggttccagatgaccgggacaattgtccgttccattacaaccccgcccagtatgac tacgacagagatgatgtgggagaccgctgtgacaactgcccctacaaccacaatccagac caggcagacacagacaagaacggggaaggagatgcttgtgccgtggatattgacggggac ggtatcctcaacgagcgtgacaactgccggtatgtctacaatgtggaccagagggacaca gacatggacggtgttggagatcagtgtgacaactgtcccctggaacacaacccagatcag ctggactctgattcagacctcatcggtgacacctgtgacaacaatcaggacatcgacgaa gatggccaccagaacaacctggataactgcccctatgtgcccaatgccaaccaggccgac catgacaaagatggcaagggagatgcctgtgatcacgatgacgacaatgatggcattcct gatgacaaggacaactgtagactggtgcccaatcccgaccagaaagactctgacggtgat ggtcgaggggatgcttgcaaagatgactttgaccatgacagtgtgccagacattgatgac atctgtcctgaaaatgttgatatcagtgagactgatttccgccgattccagatgattcct ctagatcccaaagggacatcccaaaatgaccctaactgggttgtacgtcatcagggtaaa gagctcgtccagactgtcaactgtgatcctggacttgctgtaggctatgatgagttcaat gccgtggacttcagtggcactttcttcatcaacaccgagcgggatgatgactatgccgga tttgtgttcgggtaccagtccagcagccgcttctatgttgtgatgtggaagcaaatcaca cagacctattgggacacccaccccacaaaggctcagggctactcgggtctttctgtgaaa gttgtgaactccaccactgggcctggcgagcacctgcggaatgccctgtggcacacgggc aatacccccggccaggtgcgcaccctgtggcacgacccccgtaacattggctggaaggat ttcactgcctaccgatggcgtctgagccacaggccaaagacaggtttcatcagagtggtc atgtatgaggggaagaaaatcatggctgactcaggacccatctatgacaaaacctatgct ggtggtaggctcgggttgtttgtcttctctcaagaaatggtcttcttctctgacctgaaa tacgaatgcagagattcctaa

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