Sorex araneus (European shrew): 101554078
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Entry
101554078 CDS
T07854
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara00310
Lysine degradation
sara01100
Metabolic pathways
sara04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
101554078 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101554078 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sara03036
]
101554078 (SETDB1)
Enzymes [BR:
sara01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
101554078 (SETDB1)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
101554078 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
101554078 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
MBD
Tudor_5
SET
Pre-SET
Chromo_MORC2_6th
DUF4537
53-BP1_Tudor
Chromo
Motif
Other DBs
NCBI-GeneID:
101554078
NCBI-ProteinID:
XP_004618134
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MSARPGCVGPGAATGAGQSEEIEELQQAVVDELGISMEELRLFIDEELEKMECVQQRKKQ
LAELETWVIQKETEMAQVDQLFDDASRAVTNCESLVKDVYSKLGLHYRDSSSEDESSRPT
EIIEIPDEDDDVLSIDSGDTGNRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLNQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGRKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPVCRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGAAQFKPVEPPQPPAPPAPAAPPALPTPPAPPPPSQSP
QAGENESLESQLAQSRKQVAKKSTSFRPGSVGSGHSSPPSPALSENIPGGKPGINQTYRS
PIGTTATPVPPVPLAPPAPTSPAPAAPGGPPGLPAPPAFHGMLERAPSEPSYRAPMEKLF
YLPHVCSYTCLSRIRPMRSEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCG
LCLRTMQEIERYLFETGCDFLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLS
CVNEIDTTPPPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATA
CTPGGQVNPNSGYQYKRLEECLPTGVYECNKRCNCDPNMCTNRLVQHGLQVRLQLFKTQN
KGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYES
DAPCSSDSSGVDLKDQEDGNSGTEDPDESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTR
GQKENGSSESAPKDSRPPDLGPPHIPVPSSVPSGGCNPPSSEETPKNKVASWLSCNSVSE
SGFAESDSRSSFKTGEVGAGKVEPEKSSSTELAVKEEGDSRQPKKEDLDDRNKMPLVPES
SRSYGYNASPMKTEELRRPPSKTSAHQSRRLLASTQSNPDDVLTLSSSTESEGESGTSRK
PAAGQTSATAVDSDEIQTISSGSEGDDFEDKKNMSGPAKRQVAVKSTRGFALKSTHGIAI
KSTNMASAEKGESAPVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFV
DTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcggcccgggtgcgtgggcccgggcgcggccaccggcgcgggccagtcggag
gagatcgaagagctgcagcaggcggtggtggatgaactgggcatctccatggaggagctg
cggctgttcatcgacgaggagctggagaagatggagtgtgtgcagcagcgcaagaagcag
ctggcggagctggagacgtgggtgatccagaaggagacagagatggcgcaggtggaccag
ctcttcgacgacgcctccagggcagtgacaaactgtgagtctttggtgaaggacgtctac
tccaagctgggtctccactaccgggacagtagttctgaggatgaatcgtccagacctaca
gaaataattgaaattcctgatgaagatgatgatgtcctcagtattgattcaggtgatact
gggaatagaactccaaaagaccagaagcttcgtgaagctatggctgccttaagaaagtca
gctcaagatgtccagaaattcatggatgccgttaacaagaagagtagttcccaggatctg
cataaaggaaccttgaatcagatgtctggagaactgagcaaagatggtgaccttatagtc
agcatgcgcattctgggcaagaagagaaccaagacctggcacaaaggcacccttattgca
atccagacggttgggccaggaaggaaatacaaggtgaaatttgacaacaaaggaaaaagt
ctactctcggggaaccatattgcctatgattaccaccctcctgctgacaagctgtttgtg
ggcagtcgagtggtggccaaatacaaagatggaaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttcttcgatgatggc
tatgcttcctatgtcacccagtctgaattgtatcccgtttgccggccactgaaaaaaact
tgggaggacatagaagacatctcgtgccgagacttcattgaggagtatatcactgcctac
cccaatcggcccatggtgctgctcaagagtggccagctcatcaagaccgagtgggagggc
acctggtggaagtcccgggtggaggaggtggacggcagcctggtcagaatcctcttcctg
gatgacaaaaggtgtgagtggatctatcgaggttccacgcgtctggaacccatgttcagc
atgaagacatcctcggcctctgcactagagaagaaacaagggggacaactgaggacacgt
ccaaatatgggtgctgtgaggagcaaaggccctgtagtacagtatacccaggatctgacc
agtactggggctgctcagttcaagccagtggaacccccacagcctccagctccacctgcc
ccagcagcacccccagccctccccacaccacctgccccacctcctccatcacagtccccc
caggcaggtgaaaatgaaagcttggaaagccaacttgcccaatcacggaagcaagtagcg
aaaaagagcacatcattccggccaggatctgttggctccggtcattcctcccctccgtcc
cctgcactcagtgaaaatatccctggtgggaagcctgggatcaatcagacatataggtca
cctataggcacaactgctaccccagtacccccagtgcctctagcacctccagcacctaca
tctccagcccctgcagcacctggaggccccccagggctccctgcacccccagccttccat
ggtatgctggaacgggcaccatcagagccctcctaccgtgcccccatggagaagcttttc
tatttacctcatgtttgcagttacacctgcctgtctcgaatcagacctatgagaagtgag
cagtaccgagggaagaaccccctcctagtcccgctactgtatgacttccggcggatgaca
gcccgccgccgagtgaaccgcaaaatgggctttcatgtcatctacaagaccccctgtggc
ctctgcctccggacaatgcaggagatcgagcgatacctttttgagacaggctgtgacttt
ctcttcttggagatgttttgtctggatccctatgttcttgtggaccggaaatttcagccc
tataagcctttttactatattctggacattacttatgggaaagaagatgttcctctatcc
tgtgtcaatgagattgacacaacacccccgccccaagtggcctacagcaaggagcgaatc
cctggcaagggtgttttcattaataccggccccgagtttctggttggctgtgactgcaaa
gatgggtgccgggacaagtccaagtgtgcctgccaccagttaactattcaggctaccgcg
tgcacaccagggggccaagttaaccccaactctggttaccagtataagagattggaagag
tgtctgccgacgggagtttatgagtgtaacaaacgctgtaattgtgacccaaacatgtgc
acgaaccggttggtgcagcatggactacaggttcgccttcagctgttcaagacacagaac
aagggctggggcatccgctgcttggatgatatcgctaaaggctcctttgtctgtatttat
gcaggcaaaatcctgacagatgactttgcagacaaggagggcctggaaatgggcgacgag
tattttgctaatctggaccatatcgagagtgtcgaaaacttcaaggaaggctatgaaagt
gacgccccctgctcttcagacagcagtggggttgacttaaaggaccaggaggatggcaat
agtggcactgaggatcctgacgagtccaatgatgatagctcagatgacaacttctgtaag
gatgaggacttcagcaccagctcagtgtggcgcagctatgctacccggcgccagacccgt
ggccaaaaggagaatggatcatctgaatctgcacccaaggactctcgtcctccagacctt
gggcccccacatattcctgtcccttcctcagtaccttcagggggctgcaatccaccttct
tctgaagagacgcccaagaacaaggtggcctcgtggctgagctgcaacagtgtcagtgag
agtggctttgccgagtccgatagccgctcatccttcaagacaggcgaggtgggggcaggc
aaggtggagcctgaaaagtcctccagtacagaactggccgttaaggaggagggcgacagc
aggcaacccaagaaagaggacctggatgaccggaacaagatgcctttagtcccagaaagc
tcgaggagctatggctataacgcttctcccatgaagactgaagaactgcgacgcccaccc
agcaaaacaagtgcgcatcagagccggaggctcctggcctccacacagtccaaccctgat
gatgtcctgacactgtccagcagcacagagagtgagggggaaagtgggaccagccgaaag
cccgctgctggccagacctcagccactgcagtggacagcgatgagatccagaccatctcc
tctggctctgaaggggatgactttgaggataagaagaacatgtctggtccagcaaaacgc
caggtggcggtgaaatcaacccggggttttgctctgaaatcaacccatggaattgccatt
aagtcgactaacatggcgtccgcggagaaaggcgagagtgctcctgtccgcaagaacacg
cgccagttctacgatggcgaggagtcttgctacatcatcgacgccaagctggaaggcaat
ctgggccgctacctcaaccatagctgcagccccaacctgtttgtccagaatgtcttcgtg
gatactcacgacctgcgcttcccctgggtggccttcttcgccagcaagagaatccgagct
gggacagaactcacttgggactataactacgaggtgggcagtgtggaggggaaggagctg
ctgtgctgctgtggggccatcgagtgcagagggcggctgctttag
DBGET
integrated database retrieval system
