Sorex araneus (European shrew): 101554384
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Entry
101554384 CDS
T07854
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04360
Axon guidance
sara05017
Spinocerebellar ataxia
sara05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101554384 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101554384 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
101554384 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sara04040
]
101554384 (TRPC3)
Ion channels [BR:
sara04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101554384 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
101554384
NCBI-ProteinID:
XP_004606276
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MEGSPAQRRSALMREKGRRQAVRGPAFMFHERGTSLTAEEERFLDAAEYGNIPVVRKMLE
DSHSLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALLLAISKGYVRIVEA
ILNHPGFAASGRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILAAHCHKYEVVHMLL
LRGARIERPHDYFCKCAECADRQRIDAFSHSRSRINAYKGLASPAYLSLSSEDPVLTALE
LSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGDLESAEPLELH
RHKVSLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTVAIKCLVVLVVALGL
PFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDRFEGITTLPNMTVV
DYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQLWNVLDFGMLSIF
IAAFTARFLAFLQATKAQQYVDSFVQESDLSEVTLPPEIQYFTYARDKWLPSDPQIISEG
LYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYS
YYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLYGIYNVTMVV
VLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLVPSPKSFVYFV
MRIINFSKCRRRRFQKDIEIGMGNSKSRLNLVTQSNSRVFESHSFNSILNQPTRYQQIMK
RLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKNQATEELAVLIHKLSEKL
SSSVLRGE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggagggaagcccagcccagcggcgctcggcgctcatgcgcgagaagggccggcgccag
gctgtgcggggtcccgcctttatgttccacgagcgcgggacaagcctcacggccgaggag
gagcgttttctggacgcagccgagtacggcaacatcccagtggtgcgcaagatgttggag
gactcgcactcgctcaacgtcaattgcgtggactacatgggccagaacgcgctgcagctg
gcagtgggcaacgagcacctggaggtcactgagctgctgctcaagaaggagaacctggcg
cgcatcggcgacgcgctgctgcttgccatcagcaagggctacgtgcgcatcgtggaggcc
atcctcaaccaccctggcttcgccgccagcggccgcctgaccctgagcccctgcgagcag
gagctgcaggacgacgacttctacgcgtacgacgaggacggcacgcgcttctcgcccgac
atcacgcccatcatcctggcggcgcactgccacaagtacgaggtggtgcacatgctgctg
ctgcgcggcgcgcgcatcgagcgcccacacgactacttctgcaagtgcgccgagtgcgcc
gaccgccagcgcatcgacgccttcagccactcgcgctcccggatcaacgcctacaagggg
ctggccagcccggcctacctgtccctgtccagcgaggaccccgtgctcaccgccctggag
ctcagcaacgagctggccaagctggccaacatcgagaaggagttcaagaatgattatcgg
aagctctccatgcaatgcaaagactttgtagtgggtgtgctggacctgtgccgagattca
gaagaggtggaagctattctgaatggagacctggagtccgccgaacctctggaactgcac
cggcataaagtctctctcagtcgtgtcaagttggccattaagtatgaagtcaagaagttt
gtggcccaccccaactgccagcagcagctcctgaccatctggtatgagaatctctcaggc
ctgcgggaacagacggtggccatcaagtgtctggtggtgctagttgtggcattgggcctt
ccgttcctggccatcggctactggatcgctccgtgtagcaggctgggaaagattctgcgc
agcccattcatgaagtttgtggctcatgctgcatctttcatcatcttcttgggcctgctg
gtgttcaatgcctctgatcgatttgagggcattacgacattgcccaatatgaccgttgtg
gattaccctaaacagatcttcagggtgaaaaccacccagttcacctggacggaaatgctc
atcatggtctgggttctggggatgatgtggtctgagtgcaaggagctctggctggagggg
ccacgggaatatatcctgcagttgtggaacgtgctggacttcgggatgctctccatcttc
atcgctgccttcacggccaggttcctcgctttccttcaggctaccaaggcacagcagtat
gtggacagttttgtccaggagagcgacctcagtgaagtcacgctcccaccagaaatccag
tattttacgtatgccagagacaaatggctcccctcagaccctcagatcatatctgaaggc
ctctatgccatcgcagttgtgctcagcttctctcggatcgcctacatcctccctgccaat
gagagctttggacccttacagatctctcttgggagaaccgtgaaggacatattcaagttc
atggtcctcttcatcatggtgtttcttgcctttatgatcggcatgttcatcctttattct
tactaccttggggctaaagttaatgctgcttttaccactgtagaagaaagtttcaagacg
ctgttttggtcaatatttggattgtctgaagtcacgtctgttgtgctcaaatatgaccac
aaattcattgagaatatcggctacgtcctctatggcatttacaatgtcaccatggtggtg
gtgctactcaacatgctgatcgccatgattaacagctcctaccaggagattgaggatgac
agtgacgtggaatggaagtttgcacgctccaaactctggctgtcttattttgatgatgga
aagacattgcctccaccatttagcctagttcctagtccaaagtcatttgtgtattttgtc
atgaggatcattaacttctccaaatgcagaaggagaaggttccagaaggatatagaaata
ggaatgggcaactcaaagtccaggttgaacctcgtcactcagtctaattcgagagttttt
gaatcacacagttttaacagcatcctcaatcaaccaacacgttatcagcaaataatgaaa
agacttataaagcgatatgttttgaaagcacaagtggacaaagaaaatgatgaagttaat
gaaggtgaattaaaagaaatcaagcaagatatctccagccttcgctatgaacttttggag
gacaagaaccaagcaactgaggaattagcagttctaattcataaactcagtgagaagctg
agttccagcgtgctgagaggtgaatga
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