Sorex araneus (European shrew): 101554495
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Entry
101554495 CDS
T07854
Symbol
PLXND1
Name
(RefSeq) LOW QUALITY PROTEIN: plexin-D1
KO
K06822
plexin D
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
101554495 (PLXND1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
CR_prot_dom_plant
Insulin_TMD
TIG_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
101554495
NCBI-ProteinID:
XP_004613241
LinkDB
All DBs
Position
Unknown
AA seq
1795 aa
AA seq
DB search
PSPTPTNNFALDGAAGTVYLAAVNRLYQLSGANLSLEAEAAVGPVADSPLCHAPQLPQAS
CEHPRRLTDNYNKILQLDPGQGLVVVCGSIYQGFCQLRRRGNISAVAVRFPPAAPPAEPV
TVFPSMLNVAANHPNASTVGLVLPPTAGAGGSRLLVGATYTGYGSAFFPRNRTLEDHRFE
NTPEIAIRSLDARGDLAKLFTFDLNPSDDNILKIKQGAKGQHKLGFVRAFLHPPAPPPAA
PAYAYLALTSEARAGDKESQARSLLARICLPRGAGGDAKKLTESYIQLGLQCAGGAGRGD
LYSRLVSVFPTRERLFAVFERPQGAPAARAAPAALCAFRFADVQAAIRAARTACFVEPAP
DVVAVLDSVVQGTGPACERKRNIQLQPEQLDCGAAHLQHPLSVLQPLRATPVFRAPGLSS
VAVASVSNYTVVFLGTVSGRLLKINLNESMQVASRRALTVAYGEPVHHVMQFDPADPSYL
YLMTSHQMARVSVAACALHATCADCVGAADAYCGWCTLETRCTLQRDCANASLPHFWTSA
SEGPGRCPTMAVLPAEIDVRQEYPGMILQLSGSLPDLSGAEMACDYGGSIRTVARVPGPA
FGHQLAYCDLLPRNQFPPFPPHQDHVTVEVSVRVGGHRVVSANFSIYDCGRTGQVYPHTA
CSSCLSAPWPCFWCAQQHACVSNQSRCESSPNPTSPQDCPQSLPTPLAPVPTGGSRSIEV
PVANAAFFQGTPLDCSFGPQEIFEAVWVNQTAVRCDQVVLHTNQKSQVFPLRLQLKGQPA
RFLDSPDPMTVEVYNCAMGSPDCSQCLGREDLGHLCVWSDGCRLRGAQQPLPDSCPAPEI
RTIEPLSGPLDGGTLLTIRGKNLGRRLSDVARGVWIGSVACEPLADRYTVSEGIVCATGP
APAPFSDVVVVNVTKEGRSRQRFSYVLPLVHSLEPALGPKAGGTRITIRGSHLHVGSELQ
VLLNDTEPCTELSRSDSSITCTVPGGALPAPVPVCVRFEQRGCVPGNLTFWYMRNPVITA
ISPHRSPVSGGRTITVAGERFHMVQNVSMAVHHIGREPTLCKVLNSTVLTCPSPGALSND
SAPVDFFINGRAYADEVAAAEELLDPEETPRSSPFRLDYLPDPQFSTAKRERWIRHHPGE
PLTLVIHVSAGGLGLRSDPGGPSXARRARVGQEVALEVAPQHGPADSPPPAQVQVGNFNQ
TIATLQLGGSETAIIVSIVICSVLLLLSVVALFVFCTKSRRAERYWQKTLLQMEEMESQI
REEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLNEERYVLPSQTL
NSQGSAPVQETHPLLGEWRVPESCRPHMEEGIGLFSSLLNNKHFLIVFVHALEQQKDFAV
RDRCSLASLLTIALHSKLEYYTGIMKELLVDLIDASAAKNPKLMLRRTESVVEKMLTNWM
SICMYSCLRETVGEPFFLLLCAIKQQVNKGSIDAITGKARYTLNEEWLLRENIEAKPRNL
NVSFQGCGMDSLSVRAMDTDTLTQVKEKILEAFCKNVPYSQWPRAEDVDLEWFASSTQSY
ILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLSDKKDNTRGRVKDLDTEKYFHLVL
PTDELAEPKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIREDKPPLAVK
YFFDFLEEQAEKRGISDPDTLHIWKTNRSGSCPARGELLVGGLTAPFLSQHPKYQNEFNT
SVAMAEIYKYAKRYRPQIMAALEANPTARRTQLQHKFEQVVALMEDNIYECYSEA
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
ccgtcgcccacgcccaccaacaacttcgccctggacggcgcggccggcaccgtgtacctg
gcggccgtcaaccgcctgtaccagctgtcgggcgccaacctgagcctggaggccgaggcg
gccgtgggcccggtggccgacagcccgctgtgccacgccccgcagctgccccaggcctcg
tgcgagcacccgcggcgcctcaccgacaactacaacaagatcctgcagctggacccgggc
cagggcctggtggtcgtgtgcggctccatctaccagggcttctgccagctgcggcgccgc
ggcaacatctcggccgtggccgtgcgcttcccgcccgccgcgccgcccgccgagccggtc
accgtgttccccagcatgctgaacgtggccgccaaccaccccaacgcgtccaccgtgggg
ctggtgctgccgccgaccgcgggcgcggggggcagccgcctgctggtgggcgccacgtac
acgggctacggcagcgccttcttcccgcgcaaccgcaccctggaggaccaccgcttcgag
aacacgcccgagatcgccatccgctccctggacgcgcgcggcgacctggccaagctcttc
accttcgacctcaacccgtccgacgacaacatcctcaagatcaagcagggcgccaagggg
cagcacaagctgggcttcgtgcgcgccttcctgcacccgcccgcgccgccgcccgccgcg
ccggcctacgcgtacctggcgctcaccagcgaggcgcgcgccggcgacaaggagagccag
gcgcggagcctgctggcgcgcatctgcctgccgcgcggcgcgggcggcgacgccaagaag
ctcaccgagtcctacatccagctgggcctgcagtgcgcgggcggcgcgggccgcggcgac
ctctacagccgcctggtgtccgtcttccccacgcgcgagcgcctcttcgccgtcttcgag
cggccccagggcgcgcccgccgcccgcgccgcgcccgccgcgctctgcgccttccgcttc
gccgacgtgcaggcggccatccgcgccgcgcgcaccgcctgcttcgtggagcccgcgccc
gacgtggtggccgtgctggacagcgtggtgcagggcaccgggccggcgtgcgagcgcaag
cgcaacatccagctgcagccggagcagctggactgcggggccgcccacctccagcacccg
ctctccgtcctgcagcccctccgggccacgcccgtcttccgcgcgcccggactctcctcc
gtggccgtggccagcgtgagcaactacacggtggtcttcctgggcaccgtcagtggacgg
ctgctgaagatcaacctgaacgagagcatgcaggtggccagcaggcgggcgctgaccgtg
gcctacggggagcccgtccaccacgtgatgcagttcgaccccgcggaccccagttacctc
tacctgatgacgtcccaccagatggcccgggtgagcgtggccgcctgcgccctgcacgcc
acctgcgcggactgcgtgggagcggccgacgcctactgcggctggtgcaccctggagacg
cgatgcacgctgcagcgcgactgcgccaacgccagcctgccgcacttctggaccagcgcc
agcgagggcccgggccgctgccccaccatggccgtgctgcccgccgagattgacgtgcgc
caggagtacccgggcatgatcctgcagctgtcggggagcctgcccgacctgagcggcgcg
gagatggcgtgtgactacgggggcagcatccgcacggtggcccgcgtccccggccccgcc
ttcggccaccagctggcctactgcgacctcctgccccggaaccagttcccgcccttcccg
ccccaccaggaccacgtgacggtggaggtgtccgtgcgggtcggcgggcaccgcgtcgtg
agcgccaacttcagcatctatgactgcggccgcaccgggcaggtgtacccgcacacggcc
tgcagcagctgcctgtcggcgccctggccctgcttctggtgcgcccagcagcacgcgtgc
gtctccaaccagtcgcggtgcgagagctccccaaaccccacgagccctcaggactgtccc
cagagcctgcccacccccctggcccccgtgcccacgggcggctcccggagcatcgaggtg
cccgtggccaacgccgccttcttccagggcacacccctcgactgcagcttcgggcctcag
gagatcttcgaggccgtttgggtgaaccagacagccgtgcgctgcgaccaggtggtgcta
cacaccaaccagaagagccaggtgtttccgctccgtctgcagctgaaggggcagccggcc
cgcttcctggacagccctgaccccatgacagtggaggtctacaactgcgccatgggcagc
cccgactgctcccagtgcctgggccgggaggacctgggccacctgtgcgtgtggagcgac
ggctgccgcctgcggggggcccagcagcccctgcccgacagctgcccggcccccgagatc
cgcacgatcgagcccctgagcggccccctggacgggggcacgctgctgaccatccgtggc
aagaacctgggccggcggctgagtgacgtggcccgcggcgtgtggatcggcagcgtggcc
tgcgagccgctggccgacagatacaccgtgtcggaggggatcgtgtgtgccacggggccc
gccccagcgcccttctccgacgtcgtggtggtgaacgtgaccaaggagggccggtctcgg
cagcggttctcctacgtgctgcccctggtccactccctggagcctgccctgggccccaag
gcggggggcacccggatcaccatccgcgggagtcacctgcacgtgggctcggagctccag
gtcctgctgaacgacacggagccctgcacggagctctcgcgctcggacagcagcatcacc
tgcacggtgccggggggcgccctgcccgcccccgtgcccgtgtgcgtgcgcttcgagcag
cgcggctgtgtgcccggcaacctgaccttctggtacatgcggaacccggtcatcacggcc
atcagcccccaccgcagccccgtcagcggcggcaggaccatcacggtggcgggggagcgc
ttccacatggtgcagaacgtgtccatggccgtgcaccacatcggccgggagcccacgctc
tgtaaggtcctcaactccaccgtcctcacctgcccgtcccccggggccctgagcaacgac
tcggcgcccgtggacttcttcatcaacgggcgcgcctacgccgacgaggtggccgcggcc
gaggagctgctggaccccgaggagacgccgcggagcagccccttccgcctggactacctc
cccgacccccagttctccacggccaagcgggagcgctggatccgccaccaccccggggag
cccctcaccctggtcatccacgtgagcgctggagggttggggctacggtcagaccccggt
ggcccttcatgagcccggcgggcgcgtgtgggacaggaggtggccctggaggtggccccg
cagcacggcccagctgacagccccccgcccgcgcaggtccaggtgggcaacttcaaccag
accatcgccacgctgcagctggggggcagcgagacggccatcatcgtgtccatcgtcatc
tgcagcgtcctgctgctgctgtccgtggtcgctctgttcgtgttttgcaccaagagccgc
cgtgccgagcgctactggcagaagacgctactgcagatggaggagatggagtcgcagatc
cgcgaggaaatccggaaaggttttgccgagctgcagacggacatgacggacctgaccaag
gagctgaaccgcagccagggcatccccttcctggagtacaagcactttgtgacgcgcacc
ttcttccccaagtgctcctccctcaacgaagagcgctacgtcctgccctcccagaccctc
aactcccagggcagtgcccccgtgcaggagacccacccgctgctgggagagtggagggtc
cccgagagctgccggccgcacatggaggagggcatcggcctgttctcgtctctgctgaac
aacaagcacttcctcatcgtcttcgtgcacgcgctggagcagcagaaggacttcgccgtg
cgcgacaggtgcagcctggcgtcgctgctgaccatcgcgctgcacagcaagctggagtac
tacacgggcatcatgaaggagctgctggtcgacctcatcgacgcctcggccgccaagaac
ccgaagctcatgctgcggcgcacggagtcggtggtggagaagatgctgaccaactggatg
tccatctgcatgtacagctgcctgcgggagacggtcggggagcccttcttcctgctgctc
tgtgccatcaagcagcaggtcaacaagggctccatcgacgccatcaccggcaaggcccgc
tacaccctcaacgaggagtggctgctgcgggagaacatcgaggccaagccccggaacctg
aacgtgtccttccagggctgtggcatggactcgctgagcgtgcgggccatggacaccgac
acgctgacacaggtgaaggagaagattctagaagccttctgcaagaacgtcccctactcg
cagtggccgcgcgccgaggacgtcgacctggagtggtttgcctccagcacccagagctac
atcctgcgggacctggacgacacctcagtggtcgaggacggtcgcaagaaactcaacaca
ctggcccactacaagatccctgaaggcgcctccctggccatgagcctctccgacaagaag
gacaacacccggggcagagtgaaggacttggacacggagaagtatttccatctggtgctg
cccacggatgagctggcggagcccaagaagtcgcaccggcagagccaccgcaagaaggtc
ctccccgaaatctacctgacgcgcctgctgtccaccaagggcacactgcagaagtttctg
gacgacctgttcaaggccatcctgagtatccgtgaagataagcccccgctggccgtcaag
tatttcttcgacttcctagaggaacaggctgagaagagaggcatctcggaccctgacacg
ctgcacatctggaagaccaacaggtcgggcagctgtccggccaggggcgagctccttgtg
ggcgggctcactgcgcccttcctgtcacagcaccctaaataccagaacgagttcaacacc
agcgtggccatggccgagatttacaaatacgccaagaggtaccgcccgcagatcatggcc
gccctggaggccaaccccacggcccggaggacgcagctgcagcataagttcgagcaggtg
gtggccctgatggaggacaacatctacgagtgctacagcgaggcctga
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integrated database retrieval system
