Sorex araneus (European shrew): 101558533
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Entry
101558533 CDS
T07854
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04064
NF-kappa B signaling pathway
sara04210
Apoptosis
sara04668
TNF signaling pathway
sara05200
Pathways in cancer
sara05202
Transcriptional misregulation in cancer
sara05203
Viral carcinogenesis
sara05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101558533 (TRAF1)
04668 TNF signaling pathway
101558533 (TRAF1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
101558533 (TRAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101558533 (TRAF1)
05202 Transcriptional misregulation in cancer
101558533 (TRAF1)
05203 Viral carcinogenesis
101558533 (TRAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
101558533 (TRAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
XLF_CC
Motif
Other DBs
NCBI-GeneID:
101558533
NCBI-ProteinID:
XP_004615690
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MASGSANSPRPAPDENEFPFGCPPTVCQDPPEPGAVCCTACFSANVRKDKDQICPKCRGD
APQSLSPGSLLSQEKDLPKVSEAGVGCPFAGVGCSFKGSPTFLQEHEVSSQASHLNLLLE
MMKQWKAQLGSGLGSGPVALEQNLSDLQLQKEGAGGLEVDCYRAPCSESQEARALQHCMK
DKLLAELEGKLCVFENIVAVLNKEVEASHLALAASIHQSQLDREHIQNLEQRVLELQQTL
AQKDQALGKVEQGLRLMEEASFDGTFLWKITNVARRCQESASGRTISLFSPAFYTSKYGY
KLCLRLYLNGDGVGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFR
PDLNSASFQRPQSETNVASGCPLFFPLSRLQSPKHAYVRDDAMFLKCIVDTST
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggctctgccaacagtccccggccggctccggatgagaatgagtttcctttt
gggtgccccccgacggtctgccaggacccaccagagcccggggctgtctgctgcacggcc
tgtttctctgccaacgtgaggaaagataaggatcagatctgtcccaaatgccgaggggac
gccccccagtctctaagcccaggaagccttctgtctcaggagaaggaccttcccaaggtg
tcggaggctggagtcgggtgtccctttgcaggggtcggctgctccttcaaggggagccct
acgttcttgcaggagcatgaggtttcgtctcaggcctcccacctgaacctgctgctggag
atgatgaaacagtggaaggcccagctgggctctggcctgggctccgggcccgtggccctg
gagcagaacctgtccgacctgcagcttcagaaggagggcgcggggggcctggaggtggac
tgctaccgtgccccctgctccgagagccaggaggcgcgggccctgcagcactgcatgaag
gacaaactcttggcggagctggaggggaagctgtgtgtgtttgagaatatcgtggccgtc
ctcaacaaggaggtggaggcctcacacctggccttggccgcctccatccaccagagccag
ctggaccgcgagcacatccagaacttagaacagagggtgctcgagctgcagcagacactg
gcccagaaagaccaggccctgggcaaggtggagcagggcctgcgcctcatggaggaggcc
tccttcgacggcaccttcctgtggaagatcaccaacgtggccaggcggtgccaggagtcg
gccagcggcaggaccatcagcctcttctccccagccttctacacctccaagtacggttac
aagctgtgcctccggctctacctgaacggagatggcgtgggaaagaggacacacctgtct
ctcttcatcgtgatcatgagaggggagtacgacgctctgctgccgtggcctttccggaac
aaggtcaccttcatgctgctggaccagaacaaccgagaacacgccatcgacgccttccgg
cccgacctgaactcagcgtccttccagcggccccagagcgagaccaacgtggccagtggc
tgccccctcttcttcccgctcagccggctacagtcccccaagcacgcctacgtcagggac
gacgccatgttcctcaagtgcatcgtggacaccagtacttag
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