Stenotrophomonas aracearum: PDM28_03670
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Entry
PDM28_03670 CDS
T10111
Symbol
rlmM
Name
(GenBank) 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sarc03009
]
PDM28_03670 (rlmM)
Enzymes [BR:
sarc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
PDM28_03670 (rlmM)
Ribosome biogenesis [BR:
sarc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PDM28_03670 (rlmM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmM_FDX
RLMM_N
FtsJ
TY-Chap3
Motif
Other DBs
NCBI-ProteinID:
WNH49441
LinkDB
All DBs
Position
complement(812842..813879)
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AA seq
345 aa
AA seq
DB search
MSGLLCLCRQGFEPELAGELSERAAYANIPGYARTQRNDGYVLFATDEGAALSKALPWRS
LIFARQKLVVLAELRELDPSDRITPILAALEGQQRFGDMWVEHPDSDEGKPLAGLARAFG
NALRPALRKAGLLTDKPNTALPRLHVVFVDGRHAFVCVADTRDSAPWALGIPRLKLLPEA
PSRSALKLDEALLTLMSPDEREQLVRPGMRAADLGAAPGGWTWVLTRQHMHVISVDNGPL
REHVLETGLVEHLRADGFHWQPEAPLDWMVCDMVEQPRRVAERMATWFREGWCRHAIFNL
KLPMKKRWDETRLCLELFQDQAGRPLNVRAKQLYHDREEITVLAW
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcctgctgtgcctgtgccgccagggcttcgagccggaactggccggtgagctg
tccgagcgcgccgcctacgccaacattcccggctacgcgcgtacgcagcgcaacgacggc
tatgtgctgttcgccaccgacgaaggcgccgcgctgtcgaaggcgctgccctggcggtcg
ctgatcttcgcccggcagaagctggtggtactggccgaactgcgcgagctggatccgtcc
gaccgcatcaccccgatcctggccgcgctcgaaggccagcagcgcttcggcgacatgtgg
gtggaacaccccgattccgatgaaggcaagccgctggccggcctggcccgcgccttcggc
aatgcgctgcgcccggcgctgcgcaaggccggcctgctcaccgacaaacccaacaccgcc
ctgccgcgactgcatgtggtgttcgtcgacggccgccacgcgttcgtgtgcgtcgccgac
acccgcgacagcgcaccgtgggcgctgggcattccgcgcctgaagctgctgcccgaagcg
ccttcacgttccgcgttgaagctggacgaagccctgctgaccctgatgagcccggacgaa
cgcgaacaactggtgcggccgggcatgcgcgccgccgaccttggcgccgcacccggtggc
tggacctgggtgctgacccgccagcacatgcacgtgatcagcgtcgacaacggcccgctg
cgcgagcacgtgctggaaaccggcctggtcgagcacctgcgcgccgacggcttccactgg
caacccgaggcaccgctggactggatggtgtgcgacatggtcgaacagccgcgccgcgtg
gccgagcgcatggcgacctggttccgcgagggctggtgccggcatgcgatcttcaacctg
aagctgcccatgaagaagcgctgggacgaaacccggttgtgcctggagctgttccaggac
caggccggccgcccgttgaacgtgcgcgccaagcagctgtatcacgatcgtgaggagatc
acggttctggcgtggtga
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