Stenotrophomonas aracearum: PDM28_07965
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Entry
PDM28_07965 CDS
T10111
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc01501
beta-Lactam resistance
sarc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDM28_07965
01503 Cationic antimicrobial peptide (CAMP) resistance
PDM28_07965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sarc03036
]
PDM28_07965
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sarc02000
]
PDM28_07965
01504 Antimicrobial resistance genes [BR:
sarc01504
]
PDM28_07965
Chromosome and associated proteins [BR:
sarc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PDM28_07965
Transporters [BR:
sarc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PDM28_07965
Antimicrobial resistance genes [BR:
sarc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PDM28_07965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
WNH50211
LinkDB
All DBs
Position
1705950..1707098
Genome browser
AA seq
382 aa
AA seq
DB search
MLRISLLPGRTGTCAAALIISTSLLLGGCGAGGPAGDAAAAEKDPKAEKAVEAVPVEAAA
ATRRAVAASYTGTAALEARAESQVVAKTSGVALAVLVEEGQQVRAGQPLVRLDPDRARLA
VAQSEAQMRKLENSYQRAQKLVGQQMVSAADVDQLRYDLENVRAQYRLATLELSYTTVVA
PISGVIASRSIKTGNFVQINTPIFRIVDNSRLEATLNVPERELATLRPGQPVTLVADALP
GKSFPGKVDRISPVVDAGSGTFRVVSGFGEGAEGLQPGMFGRIRIDYDQRADALVVPRLA
LLDDGDPAVFRVRDGKVARVPVKLGYAEGPWVEIRDGLVAGDKVVTAGKVALRDGTAVQV
IGDKPAATVASKAAPAKAETRQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgaatctctcttctgcccggccgcaccggaacctgcgccgcggcgctgatcatc
tccacctcgctgctgctgggcggctgcggcgccggtggcccggccggcgacgcggcggcc
gccgaaaaggaccccaaggccgagaaggccgttgaagcggtgccggtggaagccgctgcg
gccacccgccgcgcggtcgcggccagctacaccggtacggcggcgctggaagcccgcgcc
gaatcgcaggtggtggccaagacctccggcgtggcgctggccgtgctggtcgaggaaggc
cagcaggtgcgtgccggccagccgctggtgcggctggacccggaccgtgcgcgcctggcc
gtggcccagagcgaggcgcagatgcgcaagctggagaacagctaccagcgtgcgcagaag
ctggtcggccagcagatggtcagcgctgccgacgtggaccagctgcgttacgacctggaa
aacgtgcgcgcgcagtaccgcctggctacgctcgagctgtcctacaccacggtggtggcg
ccgatctccggtgtgatcgcctcgcggtcgatcaagaccggcaacttcgtgcagatcaac
acgccgatcttccgcatcgtcgacaactcgcggctggaggccaccctcaacgtgcccgag
cgcgaactggccacgctgcgtccgggccagccggtgaccctggtggccgacgcgctgccg
ggcaaatccttccccggcaaggtcgaccgcatctcgccggtggtcgatgccggcagcggc
accttccgtgtcgtaagcggcttcggcgaaggtgccgaaggcctgcagcctggcatgttc
ggtcgcatccggatcgactacgaccagcgcgccgacgcgctggtggtgccgcgcctggcc
ctgctcgacgacggcgacccggccgtgttccgcgtgcgtgacggcaaggtcgcacgggtc
ccggtcaagctgggctacgccgaagggccgtgggtggaaatccgcgacggcctggtcgcc
ggcgacaaggtcgtgactgccggcaaggtcgcgctgcgcgacggcaccgcggtccaggtg
atcggcgacaaaccggcggccaccgtggccagcaaggctgccccggccaaggcggagacc
cgccaatga
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