Stenotrophomonas aracearum: PDM28_09230
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Entry
PDM28_09230 CDS
T10111
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc01501
beta-Lactam resistance
sarc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDM28_09230
01503 Cationic antimicrobial peptide (CAMP) resistance
PDM28_09230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sarc03036
]
PDM28_09230
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sarc02000
]
PDM28_09230
01504 Antimicrobial resistance genes [BR:
sarc01504
]
PDM28_09230
Chromosome and associated proteins [BR:
sarc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PDM28_09230
Transporters [BR:
sarc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PDM28_09230
Antimicrobial resistance genes [BR:
sarc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PDM28_09230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
YknX_C
BSH_CusB
CzcB_C
HH_EMRA
HH_YBHG
Beta-barrel_RND_2
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
WNH50450
UniProt:
A0ABY9YJ22
LinkDB
All DBs
Position
1996961..1998121
Genome browser
AA seq
386 aa
AA seq
DB search
MRFPGWMARASVLAAVALGMAACGRGGGPGGERPPTLVAVEVVKAQSVPNMVELPGRVEA
SRSAEVRARADGIVERQLYVDGTEVEANAPLFQIDPRDLQARVQQARASLASARAAKAQT
SSLRARLSTLVQRKAVSVQEYESAQASFRQADAALMEAQAAVDRAQLQLDHATVRAPIKG
RTGRAQVSEGALVSAAAATLMTRIDQVDPAFVIFNPSNISMNELQRGVADGRIDVGDNKQ
VKVTILLDGGERLPTQGVVDFSETAIDPATGSRTLRARFPNPEGRLLPGQFVRGILQMGS
IRNGTSLPERAIQVGEDEASVMLVNDENVAVRRAVTLAGQADGRWVVQSGLTPGDRVIVD
GWHKIQPGQPVSIQSEPIPKAKAKAP
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcgattcccagggtggatggcgcgtgcatcggtactggcggcggttgcgctgggaatg
gcggcgtgcgggcggggcggtgggccgggcggtgaacggcccccgaccctggtcgcggtg
gaagtggtgaaggcacagagcgtgcccaacatggtggaactgccggggcgggtggaagcc
agccgctcggccgaggtgcgggcgcgcgccgatggcatcgtcgagcgccagctgtacgtg
gacggcaccgaggtcgaggccaacgccccactgttccagatcgacccgcgcgacctgcag
gcacgggtgcagcaggcccgcgcctcactggcctcggcccgcgcggccaaggcgcagacc
tcctcgttgcgcgcacgcctgtccacgctggtacagcgcaaggcggtgagcgtgcaggag
tacgaatcggcgcaggcctcgttccgccaggccgatgcagcgctgatggaagcacaggcc
gcggtggaccgcgcccagttgcagctggaccatgccaccgtgcgcgcgccgatcaagggc
cgcaccgggcgcgcccaggtcagtgaaggcgcgctggtcagtgcggcggcggccacgctg
atgacccggatcgaccaggtcgacccggcgttcgtgatcttcaatccgtccaacatttcg
atgaacgaactgcagcgcggcgtggccgacggccgtatcgacgtgggcgacaacaagcag
gtcaaggtcaccatcctgctcgacggtggcgaacgcctgccgacccagggcgtggtggat
ttcagcgaaaccgcgatcgaccccgccaccggcagccgcaccctgcgtgcacgcttcccc
aatccggaaggccggctgctgccggggcagttcgtgcgcggcatcctgcagatgggcagc
atccgcaacggcaccagcctgccggagcgcgcgatccaggtcggcgaagacgaggccagc
gtgatgctggtcaacgatgagaacgtggcggtacgccgtgcggtgacgctcgccgggcag
gccgatggccgctgggtggtgcagagtggcctgacccccggtgaccgggtgatcgtggac
ggctggcacaagatccagccggggcagccggtatccatccagtccgagccgattcccaag
gcgaaggccaaggctccatga
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