Stenotrophomonas aracearum: PDM28_12640
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Entry
PDM28_12640 CDS
T10111
Symbol
dksA
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
sarc Stenotrophomonas aracearum
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
PDM28_12640 (dksA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sarc03000
]
PDM28_12640 (dksA)
03021 Transcription machinery [BR:
sarc03021
]
PDM28_12640 (dksA)
03009 Ribosome biogenesis [BR:
sarc03009
]
PDM28_12640 (dksA)
Transcription factors [BR:
sarc03000
]
Prokaryotic type
Other transcription factors
Others
PDM28_12640 (dksA)
Transcription machinery [BR:
sarc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
PDM28_12640 (dksA)
Ribosome biogenesis [BR:
sarc03009
]
Prokaryotic type
rRNA transcription factors
PDM28_12640 (dksA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
YGR130C_N
Motif
Other DBs
NCBI-ProteinID:
WNH47538
UniProt:
A0ABY9YA21
LinkDB
All DBs
Position
complement(2778601..2779791)
Genome browser
AA seq
396 aa
AA seq
DB search
MAAKKIAKKAVKAAKKTAKPVVKKLAAKPVAKKPAAKPAPAKKSAAKAPAKAVKKAVAKK
PVAKAPVKKAAPKPVAKPAAKKAVAKSTAAKKPVAKTPVKKAAAPASKTTAKKTTPPAAK
SAPVKKAAAKPAPAKPASKPAATKPAAKPVAAPVVKSAPKPASPAPAKSVPAKAAAKPAP
APAAAPKPVAAAPAPKAPQNKNPVPVSKSPAKTPVKTESAPKPVSRPVGKVAVAVAARSA
APAPRTKVKVVEYKTDEATGRPILPAGYKPSPEEEYMSPLQLEYFRQRLHNWRAELIEES
KQTIANLQEEVRDIGDEAERATRETENSLELRTRDRYRKLIGKIESTLKRLEAGDYGYCV
DTGEEIGLDRLEARLTAERTIDAQERWEHLQKQQGD
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
gtggctgctaaaaaaattgcaaagaaggccgtcaaggccgccaagaaaaccgccaagccc
gttgtaaagaagttggcggccaagcctgttgccaaaaaaccggcggccaagccggcacct
gcgaaaaagtcggccgccaaggcgccggccaaggcggtgaagaaggccgttgccaagaag
ccggttgccaaggcgccggtcaagaaggcagcgccgaagcccgttgccaagccggcagcg
aagaaggccgtcgccaagtccacggcagccaaaaagccggtcgcaaagaccccggtgaaa
aaggccgccgcacccgccagcaagaccacggccaagaaaacgaccccaccggcggccaag
tccgcgccggtgaaaaaggcggctgccaagcctgcaccggccaagccggccagcaagcct
gccgccaccaagccggctgccaagccggttgcagcacccgtagtgaagtccgcaccgaag
ccggcatcgccggccccggccaagtctgtcccggccaaggccgcggccaagcctgctcct
gccccggccgccgcgccgaagccagtagcggccgcccccgccccgaaggccccgcaaaac
aagaatcccgtgcccgtttcgaaatcgcctgcaaaaactcccgtgaaaaccgaatccgct
cccaagcccgtgtcgcgtccggttggcaaggtcgccgtggccgtcgccgcccgttcggca
gcaccggccccgcgcaccaaggtgaaagtggtggaatacaagaccgacgaggccactggc
cgtccgatcctgccggccggctacaagccgagcccggaagaggagtacatgagcccgctg
cagctggagtatttccgccagcgtctgcacaactggcgcgccgaactgatcgaagaatcc
aagcagaccatcgcgaacctgcaggaagaagttcgcgacatcggcgacgaagccgagcgc
gctacccgtgaaaccgaaaactcgctggaactgcgcacccgcgaccgttaccgcaagctg
atcggcaagatcgaaagcacgctcaagcgccttgaagcgggcgactacggctactgcgtc
gacaccggcgaagaaatcggcctggaccgtctcgaagcgcgcctgaccgccgaacgcacc
atcgacgcccaggaacgttgggagcacctgcagaagcagcagggcgactga
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