Stenotrophomonas aracearum: PDM28_15050
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Entry
PDM28_15050 CDS
T10111
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc01501
beta-Lactam resistance
sarc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDM28_15050
01503 Cationic antimicrobial peptide (CAMP) resistance
PDM28_15050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sarc02000
]
PDM28_15050
01504 Antimicrobial resistance genes [BR:
sarc01504
]
PDM28_15050
Transporters [BR:
sarc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PDM28_15050
Antimicrobial resistance genes [BR:
sarc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PDM28_15050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-ProteinID:
WNH47981
UniProt:
A0ABY9YAT8
LinkDB
All DBs
Position
complement(3321573..3324698)
Genome browser
AA seq
1041 aa
AA seq
DB search
MKLSDISIQRPVFAVVMSLLLVVLGIMSFTRLTLRELPAIDPPIVSVSVDYTGASAAVIE
SRITQVLEDALAGIEGIDTINARSSNGRSQVSIEFTSNRDIEAAANDVRDAVSRVADRMP
EEARPPEIAKVESDADPIIWFNMTSSSMNTLELSDYADRYVVDRFSSLDGVAQVRIGGRQ
RYAMRIWLDRDQLAARGLTVGDVETALRNENVELPAGRIESADRDFTLRVERNYVKPEDF
ATIPLGKGADGYVVRMGDVAKIELASSERRAYYRSNGEPGIGLGIVKTSTANSLDVARTA
RAEAERVGQTLPEGTHIFVAFDNTTFIEAAVDRVYATLVEAMLLVLVVIWLFLGSFRAAL
IPAVTVPVCLVAAFIALYAFGFSINLLTLLALVLCIGLVVDDAIVVVENVQRRIDLGEPP
LVASKRGTAQVAFAVIATTAVLVAVFLPVGFLEGNTGRLFRELAVALASAVALSAFVSLT
LTPMMASKLLKPHTGQAPKGLHGLINRNLDRVSASYGRVLDAHVGKIWIYVAVMVLSLAA
SALLLKVLPSELAPAEDRGSFQIMIDGPEGAGYDYTVGQVQEVEKIVAGFVGDDKPIVRA
NPRVPGGFGASEEMHTGRISVFLQPWRERTTDTPEVAAELQKSLDGIRGVRVRTQVGGGL
VRSGGQPFQIVLGGPEYAEIAGWRDRMLERMAANPGLVGPDSDYKETRPQMRVNIDRQRA
ADLGVSVTAIGSALETMMGSRRVTTFVDNGEEYDVLVQAGREGRASPDDLAAIRVRANSG
ELVPLSNLVTLSEVAEAGNLNRFNRLRSITISAGLAPGYPLGEAIAWAQQTAREELPQHA
QIDWKGESREYQNAGSAVLLTFAMALLVVYLVLAAQFESFIHPLVIMLTVPLGVLGALLG
LYVSGGTINLFSQIGIVMLVGLAAKNGILIVEFANQLRDEGRDVHRAIVESCMVRLRPIL
MTSIATVVGAIPLVVAGGPGSASRGTIGIVVIFGVTVSTFLSLFVVPAFYALLAPYTRSP
EAVARELEKQESETPSVGGHA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttccgacatttccatccagcggccggtgttcgccgtcgtgatgagcctgctg
ctggtggtgctcggcatcatgtcgttcacccgcctgaccctgcgcgaactgcccgccatc
gacccgccgatcgtctcggtctcggtcgactacaccggcgcctctgccgccgtcatcgaa
agccgcatcacccaggtgctcgaagacgccctggccggtatcgaaggcatcgataccatc
aacgcgcgcagctccaacgggcgctcgcaggtcagcatcgaattcacctccaaccgcgac
atcgaagcggccgccaacgacgtccgcgacgccgtcagccgcgtcgccgaccgcatgcct
gaagaggcacgcccgccggaaatcgccaaggtcgagagcgacgccgacccgatcatctgg
ttcaacatgacctcctccagcatgaacacgctggagctgagcgactacgccgaccgctat
gtggtcgaccgcttctccagcctcgacggcgtcgcccaggtccgcatcggcggccgccag
cgctacgccatgcgcatctggctcgaccgcgaccagctcgccgcgcgcggcctcaccgtc
ggcgacgtcgaaaccgcactgcgcaacgagaacgtcgaactgcccgccggccgcatcgaa
tcggccgaccgcgacttcaccctgcgcgtcgaacgcaattatgtgaagcccgaagacttc
gccaccatcccgctcggcaagggcgccgacggctacgtcgtgcgcatgggcgatgtcgcc
aagatcgaactggcctcgtccgagcggcgcgcctattaccgcagcaacggcgaacccggc
atcggcctgggcatcgtcaagacctccaccgccaactcgctcgacgtcgcccgcaccgcg
cgcgccgaagccgagcgggtagggcagaccttgcccgaaggcacccacatcttcgtcgcc
ttcgacaacaccaccttcatcgaagccgccgtcgaccgcgtctacgccaccctggtggaa
gcgatgctgctggtgctggtggtgatctggctgttcctcggcagtttccgtgccgcactg
attcccgcagtaaccgttccggtctgcctggtcgccgccttcatcgcgctgtacgccttc
ggcttctcgatcaacctgctcaccctgctggcgctggtgctgtgtatcggcctggtggtc
gacgacgccatcgtcgtggtcgaaaacgtgcaacggcgcatcgaccttggcgaaccgccg
ctggtcgcctccaaacgcggtaccgcgcaggtggccttcgcggtcatcgccaccaccgcc
gttctggtcgctgtgttcctgccggtgggcttcctggaaggcaacaccgggcgcctgttc
cgcgaactggcggtcgcgctggcatctgccgtggcgctgtcggcgttcgtctcgctgacc
ctcaccccgatgatggcctccaagctgctcaagccgcacaccggccaggcgccgaagggc
ctgcacgggttgatcaaccgcaacctggaccgcgtctcggcgtcttacggccgagtgctg
gacgcccacgtcggcaagatctggatctacgtcgcggtgatggtgctgtcgctggccgcc
agcgcgctgctgctcaaagtgctgccctccgaactggccccggccgaagaccgcggctcg
ttccagatcatgatcgacggcccggaaggcgccggctacgactacaccgtcggccaggtg
caggaagtggagaaaatcgtggctggcttcgtcggcgacgacaaacccatcgtgcgcgcc
aacccgcgcgtgcccggcggcttcggtgccagcgaagaaatgcataccggccgcatcagc
gtgttcctgcagccgtggcgcgaacgcaccaccgatacccctgaagtggccgccgaactg
cagaagagcctggacggcattcgcggcgtgcgcgtgcgtacccaggtcggtggcggcctg
gtccgcagtggcggccagccgttccagatcgtgctgggtggccccgaatacgcggaaatc
gccggctggcgcgatcgcatgctcgaacgcatggcggccaatccgggcctggtcggtccg
gattcggactacaaggaaacccgcccgcagatgcgcgtcaacatcgaccgccagcgtgcg
gccgacctcggcgtctcggtcaccgcgattggttcggcgctggaaaccatgatgggttcg
cgccgcgtcaccaccttcgtcgacaacggcgaagagtacgacgtgctggtccaggccggc
cgcgaaggccgcgccagcccggacgacctcgccgccatccgcgtgcgtgccaacagtggc
gaactggtgccgctgtccaacctggtcacgctcagcgaagtggccgaggcaggcaacctc
aaccgcttcaaccgcctgcgctcgatcaccatcagcgccggcctggccccgggctacccg
ctcggtgaagccattgcctgggcccagcagaccgcccgcgaagaattgccgcagcacgcg
cagatcgactggaagggcgaatcgcgcgagtaccagaacgccggcagcgccgtgctgctg
accttcgcgatggcgctgctggtggtgtacctggtgcttgccgcgcagttcgaaagcttc
atccacccgctggtgatcatgctgaccgtgccgctgggcgtgctcggcgcgctgctcggc
ctgtacgtcagcggcggcaccatcaacctgttcagccagatcggcatcgtcatgctggtc
ggcctggcggcgaagaacggcatcctgatcgtcgaattcgccaaccagctgcgcgacgaa
ggccgcgacgtgcaccgcgccatcgtcgaatcgtgcatggtgcgcctgcgcccgatcctg
atgacctccatcgccaccgtggtcggcgcgatcccgctggtggtcgccggcggcccgggc
tctgccagccgcggcaccatcggcatcgtggtgatcttcggcgtcaccgtctccaccttc
ctctcgctgttcgtcgtgccggcgttctacgcgctgctggcgccgtacacccgttcgccg
gaagcggtggcgcgtgagctggagaagcaggaatcggaaacgccatcggtcggcggccat
gcctga
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