Stenotrophomonas aracearum: PDM28_16250
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Entry
PDM28_16250 CDS
T10111
Symbol
smeD
Name
(GenBank) multidrug efflux RND transporter periplasmic adaptor subunit SmeD
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc01501
beta-Lactam resistance
sarc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
Chromosome and associated proteins [BR:
sarc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PDM28_16250 (smeD)
Transporters [BR:
sarc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PDM28_16250 (smeD)
Antimicrobial resistance genes [BR:
sarc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PDM28_16250 (smeD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WNH48204
LinkDB
All DBs
Position
complement(3607188..3608363)
Genome browser
AA seq
391 aa
AA seq
DB search
MSPTPYRFLALSLAIALTLSACGGGEQEGQQGGPGQVTVATLKAEQVGLTRELPGRTNAF
LVAEVRPQVSGIVAKRLFTEGGLVTAGQPLYQVDDASYRAQANSARAQLARAEATANAAR
LSAKRITELAKVDAVSQQDLENAVAAQKQAEADVGAAKAALDAANVTLGFARITAPISGR
IGKSSVTQGALVSAGQAEALATVQQLDPIYVDLTQSASELLQLRRELASGRLQDNQSLPV
TILLDDGTPFEHKGSLEFSEVSVDPTTGSYALRVKVANPDQVLMPGMYVRAQVGSGVRES
ALLVPMQGIARDAKGDTSAMVVGKDNKVEVRPVKVSRALGSTWLVEDGLKAGDKVIVEGL
QKIQPGMPVQATEMGAAPAAPAAPAAAADKQ
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaaccccgtatcgcttcctcgccctgtccctggcgatcgccctgaccctgtcc
gcctgcggcggcggtgagcaggaaggccagcagggcggtcccggccaggttaccgtcgcc
accctcaaggccgaacaggtcggcctgacccgcgaactgcccggccgcaccaacgccttc
ctggtcgccgaagtacgcccgcaggtcagtggtatcgtcgccaagcgcctgtttaccgaa
ggcggcctggtcaccgccggccagccgctgtaccaggtcgacgacgccagctaccgcgcg
caggccaacagtgcccgtgcccagctcgcgcgcgccgaagccaccgccaatgccgcacgc
ctgagcgccaagcgcatcacggaactggccaaggtcgacgcggtcagccagcaggatctc
gaaaacgccgtcgccgcgcagaagcaggccgaagccgacgtcggtgccgccaaggccgcg
ctcgacgccgccaatgtcaccctcggctttgcccgcatcaccgccccgatcagcggccgc
atcggcaagtcctcggtcacccagggcgcgctggtcagcgccggccaggccgaggccctg
gccaccgtgcagcagctcgacccgatctacgtcgacctgacccagtccgccagcgaactg
ctgcagctgcgccgcgaactggccagcggccgcctgcaggacaaccagagcctgccggtg
accatcctgctcgacgacggcacccccttcgagcacaagggcagcctggaattctccgaa
gtcagcgtcgaccccaccaccggcagctacgcgctgcgggtcaaggtcgccaaccccgac
caggtgctgatgcccggcatgtacgtgcgcgcccaggtcggcagcggcgtgcgcgaaagc
gccctgctggtgccgatgcagggcatcgcccgcgacgccaagggcgacaccagcgccatg
gtggtcggcaaggacaacaaggtcgaagtgcgcccggtcaaggtcagccgcgcgctgggc
agcacgtggctggtcgaagacggcctgaaggccggcgacaaggtcatcgtcgaaggcctg
cagaagatccagccgggcatgcccgtgcaggccaccgagatgggcgccgcgcccgctgca
ccggcagcgccggccgccgcagccgacaagcagtaa
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