Sphingomonas aliaeris: H5J25_15080
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Entry
H5J25_15080 CDS
T07559
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sari
Sphingomonas aliaeris
Pathway
sari01501
beta-Lactam resistance
sari01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H5J25_15080
01503 Cationic antimicrobial peptide (CAMP) resistance
H5J25_15080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sari02000
]
H5J25_15080
01504 Antimicrobial resistance genes [BR:
sari01504
]
H5J25_15080
Transporters [BR:
sari02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H5J25_15080
Antimicrobial resistance genes [BR:
sari01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H5J25_15080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF4232
Motif
Other DBs
NCBI-ProteinID:
QQV76724
UniProt:
A0A974NTM2
LinkDB
All DBs
Position
complement(3200594..3203764)
Genome browser
AA seq
1056 aa
AA seq
DB search
MSRYFIDRPIFAWVIAIVLMLAGGIAIRGLAIAQFPEIAPPAVTISATYPGADATTLENT
TTQIIEQQMKGIDNLRYFSSSSSSAGTVTITLTFEQGTDPDIAQVQVQNKLQAATPLLPQ
EVQQQGIRVAKSSASFLLIVALYSSDGSHSANDLSDYVAARLQDPLSRVAGVGDTQVFGA
QYAMRIWVDPLKLNAYQLTIADVTAAVSAQNAQVSAGQIGAQPAPKEQMLNATVSVQSRL
QTPEQFGNISLKTTEGGAVVRLSDVARVELGAEQYGFDPRYNGQPASGFGVKLAPGANAL
ATVDAVKAEVERIAKTFPQDVKVVYPYDSTPFVRLSVKQVIETLIEAVVLVFLVMFLFLQ
NWRATIIPTIAVPVVLLGTFAVMALAGFSINTLTLFGMVLAIGLLVDDAIVVVENVERLI
QDEHLSPKEAARKSMDEISGALVGIGLVLSAVFLPMAFFGGSTGVIYRQFSITIVSAMVL
SVMVALILTPALCAAILKPHDPDKAEGKGPLARFFRWFNDKFERGQVKYEKGVKSTARHW
GRSLIIYAVIVLGMCLLFFRLPGGFLPDEDQGTLIALVQGPSGATTARTDKGLDLVRSHF
LNNEKANVDAVFTINGFSFAGQGQNAGLAFIKLKSWEDRPGADNRAPAIVGRAMGAFSQY
KDGTIFALAPPAVQELGNATGFDAQLVDTGGIGHDKLLAARNMMLSMAAQDKRLAQVRPV
SLDDAPQLKVEIDQDKARALGLDLSAINSTIATAWGGSYVNDFIDRGRVKRVYIQADAPF
RLAPEDIGDFYVRGAAGQMSPYPAFSTLSWAQAPVQLTRYNGQSAMQIQGSPGQGLSSGD
AMNAMEEIHAKLPPGTTLEWTGLSYEERLSGGQAPALYGLSMIIVFLCLAALYESWTVPI
SVLLVVPLGILGAVLAAVLTGLNNDIYLQVGLITTIGVSAKNAILIVEFAEERIAEGMAP
FEAAVAAARLRLRPILMTSLAFIFGVLPLAISTGAGAGGQNAIGRAVVGGMLSATILAIF
FVPMFFVVVLRLFGQGGPKAAERHDHSDGEPAVQGA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgctatttcatcgaccgtcccattttcgcatgggtcatcgccatcgtgctcatg
ctggcgggtggtatcgccatccgcggcctggcgattgcccagttcccggaaatcgcgccg
ccagcggtgacgatcagcgcgacctatccgggcgcggatgcgaccacgctggagaatacg
acgacgcagatcatcgagcagcagatgaagggtatcgacaaccttcgctacttctcgtcc
tcctcctcctccgcgggcaccgtcacgattacgctgacgttcgaacagggcactgatccg
gacatcgcgcaggtgcaggtgcagaacaagctgcaggcggcgacgccactcctgccgcag
gaagtgcagcagcagggtatccgcgtcgcgaaatccagcgccagtttcctgttgatcgtc
gctttgtattcatcggacggcagccatagcgcgaacgatctgtccgactatgtcgccgcg
cgtttgcaggatccgctcagtcgcgtagccggcgtcggcgacacgcaggtgtttggcgcg
caatatgcgatgcgcatctgggtcgatccgctgaagctcaatgcctatcagctgacaatc
gcggacgtcaccgctgcggtctccgcgcagaacgcccaggtttccgccggtcagatcggt
gcgcagcccgccccgaaggagcagatgctcaacgcgaccgtctcggtccagtcgcggctt
cagacgcccgagcagttcggcaatatcagcctgaaaacgactgagggcggcgcggtcgtt
cgcctgtccgacgtcgcgcgcgtcgaactgggtgcggagcaatatggcttcgacccacgc
tataacggccaaccggcgtccggtttcggtgtgaaactggcgccgggtgccaatgctctg
gctacggtcgatgccgtcaaggcggaagtcgagcggatcgccaagacgttcccgcaggac
gtcaaggtcgtctatccgtacgattccacgccgttcgtccgcctgtcggtcaagcaggtg
atcgagacgctgattgaggcggtcgttctcgtgttcctcgtcatgtttctgttcctgcag
aattggcgcgcgacgatcatcccgacgatcgcggtgccggtcgtgctgctcggcacgttc
gcggtgatggcgctggccggtttctcgatcaacacgctgaccttgttcggaatggtgctg
gcgatcggcctgttggtcgatgacgcgatcgtcgtggtggaaaacgtggagcgcctgatt
caggacgaacatctttcgcccaaggaagcggcgcgaaaatcgatggacgagatcagcggc
gcgctggtcggcatcggcctcgtcctgtccgcggtgttcctgccgatggcgttcttcggc
ggatcgaccggcgtcatctatcgccagttctcgatcacgatcgtctcggcgatggtgctg
tcggtgatggtcgcgttgatcctgacgccggccttatgcgccgcgatcctgaagccgcac
gatccggacaaggcggaaggcaaggggccgctcgcgcgcttcttccgctggttcaacgac
aagttcgaacgtggccaggtgaagtacgagaagggcgtgaagagcacggcgcggcattgg
ggtcgctcgctgatcatctatgccgtcatcgtgcttggcatgtgcctgttgttcttccgc
ttgccgggaggcttcttgccggacgaagatcaggggacgctgatcgcgctcgtccagggt
ccgtcgggggcgacgaccgcccgcaccgacaaggggctggacctcgtccgcagtcatttc
ctgaataatgaaaaggcgaacgtggatgccgtgttcacgatcaacggattcagtttcgca
ggacaggggcagaatgccggcctggccttcatcaagctgaagtcctgggaggatcgacca
ggtgccgacaaccgcgctcccgcgatcgtcggccgcgcgatgggggcgttctcgcaatat
aaggacggcacgatcttcgccctggccccgccggccgtgcaggagctgggcaacgccacc
ggcttcgacgcgcagttggtcgataccggcgggatcgggcacgacaagctgctcgccgcg
cggaacatgatgctcagcatggcggcacaggacaaaaggctggcccaggtccgtcctgtc
agtcttgacgatgcgccgcagttgaaggtggaaatcgaccaggacaaggcgcgcgcgctg
ggtctcgacctgtcggcgatcaattctacgatcgcgacggcgtggggtggatcgtacgtc
aacgactttatcgatcgcggccgcgtgaagcgcgtctatatccaggcggatgcgccgttc
cggctcgcgccggaggatattggcgacttctacgttcgcggtgcggccggtcagatgtcg
ccttatcctgccttttccacgctgagttgggcgcaggcgccggtgcagctgacccgctat
aacggacagtccgcaatgcagatccagggttcgccgggtcagggcctcagcagcggtgac
gcgatgaatgcgatggaggaaatccatgccaagctgccgccgggcaccacgctggaatgg
accggcctttcctatgaggagcggctgtcgggtggtcaggcgccagccttgtacggcctg
tcgatgatcatcgtgttcctctgcctcgccgcgctgtacgaaagctggacggtgccgatc
tcggtgctgctcgtcgtgccgctcggcattctgggtgcggtgctcgccgccgtgctgacg
gggctgaacaacgacatctacctgcaggtcggcctgatcaccacgatcggcgtgtcggcg
aagaacgcgatcctgatcgtggagtttgccgaagaacggatcgcggagggcatggcgccg
ttcgaagccgcggtcgccgccgccagactacgtctgcgcccgatcctgatgaccagtctc
gcgttcatcttcggcgtgctgccgctggcgatctctaccggagcgggtgcaggcggccag
aacgcgatcggccgcgcggtcgtcggcggcatgttgtcagcgacgatcctcgctatcttc
ttcgtgcccatgttcttcgtcgtcgtcctgcgcctgttcggccagggcggccccaaagcc
gcggaacggcacgatcattcggacggcgaacccgccgtccagggagcatga
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