Sphingomonas aliaeris: H5J25_16500
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Entry
H5J25_16500 CDS
T07559
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sari
Sphingomonas aliaeris
Pathway
sari03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H5J25_16500 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sari03400
]
H5J25_16500 (nth)
Enzymes [BR:
sari01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H5J25_16500 (nth)
DNA repair and recombination proteins [BR:
sari03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H5J25_16500 (nth)
Prokaryotic type
H5J25_16500 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QQV76953
UniProt:
A0A974NU09
LinkDB
All DBs
Position
3492678..3493358
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AA seq
226 aa
AA seq
DB search
MKRADVFEFYRRLAEHDPHPVTELEYGNPFQLVVAVALSAQSTDIGVNKATRALFAEVDT
PEKMLALGEDGLKAHIKTIGLFNTKAKNVIALSRMLVDEHGGVVPSDRDALERLPGVGRK
TANVVMNVAFGAETFAVDTHIFRVGNRTGLARGKTPLAVELKLDTATPQPFRLHAHHWLI
LHGRYVCKARRPECWRCIVRDLCAFKPKTPAPVVPGARKDEEGDDA
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgcggacgtcttcgaattctatcggcggctggcggaacacgatccgcatccg
gtgaccgaactggaatacggcaatccgttccagctcgtcgtggcagtcgccttgtccgcg
caatcgaccgatatcggcgtcaacaaggcgacccgcgctctgttcgcggaggtcgacacg
ccggaaaagatgctcgcgctcggcgaggacgggctgaaggcgcatatcaagacgatcggc
ctgttcaacaccaaggcgaagaacgtcattgcgctgtcgcggatgctggtggacgaacat
ggcggcgtcgtaccgtcggatcgcgacgcgctggaacgcctgcccggtgtcgggcgcaag
accgccaacgtggtgatgaacgtcgccttcggcgcggagacgttcgcggtcgacacgcac
atcttccgcgtcggcaatcgcaccggtctcgcccgcggcaagacgccgctcgcggtcgaa
ctgaagctcgacacggcgacgccgcaaccgttccggctgcacgcgcatcactggctgatc
ctgcacgggcgctatgtctgcaaggcgaggcggccggaatgctggcgatgcatcgtccgc
gatctttgcgcgttcaagcccaagacgcccgcgccggtcgtgccgggcgcgcggaaggat
gaggagggagacgatgcttag
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