Candidatus Sarcina troglodytae: HH195_02725
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Entry
HH195_02725 CDS
T06935
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sarj
Candidatus Sarcina troglodytae
Pathway
sarj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HH195_02725 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sarj03400
]
HH195_02725 (nth)
Enzymes [BR:
sarj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HH195_02725 (nth)
DNA repair and recombination proteins [BR:
sarj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HH195_02725 (nth)
Prokaryotic type
HH195_02725 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
DUF3349
ATG1-like_MIT2
Motif
Other DBs
NCBI-ProteinID:
QPJ84885
LinkDB
All DBs
Position
617770..618405
Genome browser
AA seq
211 aa
AA seq
DB search
MKQRTKEILELLKEEYPDAKCELNYKTPFQLLVATILSAQTTDKKVNEVTKTLFNDYPDV
ESFSKITQEELENRIRVIGLYRNKTKNLLMMCKQLKENFNGEVPKTIEEISSLAGAGRKT
ANVVISNAFNIPAIAVDTHVFRVSNRIGLADGKNVLDVEKQLQKEISKDMWSLAHHLIIF
HGRRCCSAKSPKCNNCIINQYCKYYKEMTEK
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaagaacaaaagaaattttagaactattaaaagaagagtatccagatgctaaa
tgtgaattaaattacaaaacaccatttcaacttttagtagctactattttatcagcacaa
acaactgataaaaaggtaaatgaagtaactaaaactttgtttaatgattatccagacgtt
gaatcatttagtaaaattactcaagaagaattagaaaatagaatcagagtaataggtcta
tatagaaataaaactaaaaatttacttatgatgtgcaagcagttaaaggaaaattttaat
ggagaggttccaaaaactatagaagaaataagttctttagctggtgctggaagaaagact
gctaatgttgttatatcaaatgcttttaatattccagcaattgcagttgatactcatgtg
tttagagtttcaaatagaataggtcttgcagatggaaaaaatgttttagatgttgaaaaa
caacttcaaaaagaaatatcaaaggatatgtggtcattagcacatcacttaataatattc
catggaaggagatgctgtagtgccaaatctcctaaatgcaataattgtataattaaccaa
tactgtaaatattataaagaaatgactgaaaaataa
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