KEGG   Salmo salar (Atlantic salmon): 100136457
Entry
100136457         CDS       T04363                                 
Symbol
tnf-alpha-1
Name
(RefSeq) tumor necrosis factor alpha-1 precursor
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04010  MAPK signaling pathway
sasa04060  Cytokine-cytokine receptor interaction
sasa04150  mTOR signaling pathway
sasa04210  Apoptosis
sasa04217  Necroptosis
sasa04350  TGF-beta signaling pathway
sasa04620  Toll-like receptor signaling pathway
sasa04621  NOD-like receptor signaling pathway
sasa04622  RIG-I-like receptor signaling pathway
sasa04625  C-type lectin receptor signaling pathway
sasa04920  Adipocytokine signaling pathway
sasa05132  Salmonella infection
sasa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100136457 (tnf-alpha-1)
   04350 TGF-beta signaling pathway
    100136457 (tnf-alpha-1)
   04150 mTOR signaling pathway
    100136457 (tnf-alpha-1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100136457 (tnf-alpha-1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    100136457 (tnf-alpha-1)
   04217 Necroptosis
    100136457 (tnf-alpha-1)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100136457 (tnf-alpha-1)
   04621 NOD-like receptor signaling pathway
    100136457 (tnf-alpha-1)
   04622 RIG-I-like receptor signaling pathway
    100136457 (tnf-alpha-1)
   04625 C-type lectin receptor signaling pathway
    100136457 (tnf-alpha-1)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    100136457 (tnf-alpha-1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100136457 (tnf-alpha-1)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100136457 (tnf-alpha-1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:sasa04052]
    100136457 (tnf-alpha-1)
   00536 Glycosaminoglycan binding proteins [BR:sasa00536]
    100136457 (tnf-alpha-1)
Cytokines and neuropeptides [BR:sasa04052]
 Cytokines
  Tumor necrosis fators
   100136457 (tnf-alpha-1)
Glycosaminoglycan binding proteins [BR:sasa00536]
 Heparan sulfate / Heparin
  Cytokines
   100136457 (tnf-alpha-1)
SSDB
Motif
Pfam: TNF Mobilization_B
Other DBs
NCBI-GeneID: 100136457
NCBI-ProteinID: NP_001117061
UniProt: Q5BMN3
LinkDB
Position
ssa05:complement(54270847..54272858)
AA seq 246 aa
MEGYAMTTGDMERGPVYMTTVTAVAEGKASRGWLWRLCGVLLVAALCAAAALLFAWCQHG
RLATMQDKMEPQLEILIGAKDTHHTLKQIAGNAKAAIHLEGEYNPNLTADTVQWRKDDGQ
AFSQGGFELQGNQILIPHTGLFFVYSQASFRVKCNGPGENTTPLSHVIWRYSDSIGVNAN
LLSGVRSVCQRNYGDAESNIGEAWYNAVYLGAVFQLNEGDKLWTETNRLTNVEPEQGKNF
FGVFEL
NT seq 741 nt   +upstreamnt  +downstreamnt
atggaggggtatgcgatgacaactggcgacatggagaggggccctgtgtacatgacaacg
gtgacagctgttgctgagggaaaggcctccagaggttggctatggaggctgtgtggcgtc
ctcttagtagcagctttatgtgcggcagcagccctgctctttgcctggtgtcagcatgga
agactggcaacgatgcaggacaaaatggagcctcaactggagatactcattggtgcaaaa
gatacccaccatacattgaagcagattgccggcaatgcaaaagcagccatccatttagag
ggtgaatacaatcctaatcttaccgctgacactgtgcagtggagaaaggatgacggccag
gctttttcccagggcgggttcgagctacaggggaaccaaatcctcatcccacacactggg
ctcttcttcgtttacagccaggcttcgtttagggtcaagtgcaatggcccgggcgagaat
accactcctctgagtcacgttatttggcgctattcggactccatcggggttaatgctaat
cttcttagcggggtaaggtcagtttgtcaacgaaactacggtgatgctgagtccaatatc
ggcgaagcctggtacaatgcggtttaccttggtgcagtgtttcagctgaatgaaggggac
aaactgtggactgagaccaatcgactgaccaacgtggagccagagcagggcaagaacttt
tttggtgtgtttgaactatga

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