KEGG   Salmo salar (Atlantic salmon): 100136501
Entry
100136501         CDS       T04363                                 
Name
(RefSeq) hemicentin-1
  KO
K06454  T-cell surface glycoprotein CD4
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03250  Viral life cycle - HIV-1
sasa03260  Virion - Human immunodeficiency virus
sasa04060  Cytokine-cytokine receptor interaction
sasa04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100136501
   03260 Virion - Human immunodeficiency virus
    100136501
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100136501
   04514 Cell adhesion molecules
    100136501
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:sasa04090]
    100136501
CD molecules [BR:sasa04090]
 Proteins
  100136501
SSDB
Motif
Pfam: Ig_3 V-set ig I-set Ig_2 Sp38 DUF6249
Other DBs
NCBI-GeneID: 100136501
NCBI-ProteinID: XP_014055853
UniProt: A0A1S3RU77
LinkDB
Position
ssa05:complement(49728829..49747331)
AA seq 489 aa
MKYVSGYLSIVIALFISSTGAEDVVYGQVGGMVTLPVLKWGSEKVLVQWYFGMNTQPLIT
RNAQGRETIDPQWKDRLSLSKTDFSLIINKIRLEDFKSFKCELKDFRPQQITSVTSFRLS
HVSVQPVSPLLVGKNLNLKCDIKEIFEGTQRRWLSPQKQDLNKDTRVQIGNDGSLKVMKV
TGQDHGEWTCVVTYQGRETYVNTPVTVIDLSPAHSQPIYTSVSSFSLLHLPCFFSFPLPL
SWSDSQENGIQGGRWTFTPSPAAGSLTGVVQTLVNLSLGPPLAWVVNQKRGLDVSALQKK
NLNLSLSKKGVTVGDRGNYTCAVEFQRDDTLKRVMRVEVLQLFTSPVPVAFVGQEVNLTC
TLGQPLTSDLEVKWIPPHHSTLLPLGSSTHPTLLTIPEATYGDGGLWRCELWGNKTKLTS
VEITLKIERVPVDVWLLVTICAAAVIFVLLLILTVILIRRHRQRMMMPRRGKRRFCNCKD
PTPKGFYRN
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgaagtatgtttctggatacctttcaatcgttattgctttgttcatctcttcaacaggg
gctgaagatgtggtgtatggtcaggtgggagggatggtcacactccccgtgttgaagtgg
ggttcagaaaaggtgttggtacaatggtactttgggatgaacacacaacctttgataacc
cgcaacgcccaaggtcgagagacgatagatccacagtggaaagacaggctgtctctgtca
aagactgacttctccctgatcatcaacaaaatcagactggaggacttcaaatccttcaaa
tgtgaactgaaagatttcaggccacaacaaattacctcagtcacctcattcagactgtcc
catgtgagtgtacagccagtctctcccttgttggttgggaagaatcttaatctgaagtgt
gacataaaggaaatatttgaggggacacagagaagatggcttagtccccagaaacaggac
ctgaacaaggacacgcgtgtccagatcggaaatgacggcagcctgaaagtaatgaaagtc
actggtcaagaccatggagagtggacctgtgtggtgacataccagggcagggaaacatat
gtcaacacccctgttactgtaatagacctctcccctgctcattcacagcctatctacacc
tctgtctcctccttctctcttctccatctgccatgtttcttttcctttcctctgcctcta
tcctggtcagacagccaggaaaatggcatccagggaggccgctggacctttaccccaagc
ccagcggcaggctccctcactggggttgtccagaccctcgtcaacctctccctggggcct
ccattagcctgggtggtcaatcagaagagaggtctggatgtctcagccctgcagaagaaa
aatctaaacctctccctgtcaaagaaaggggtgacggtgggggacaggggcaactacacc
tgcgctgtggagttccagagggacgacaccctgaagagagtaatgcgtgtggaggtgcta
cagttgtttacctctccagttccagtggcctttgtaggtcaggaggtcaacctcacctgt
accctgggccagcctctgacctctgacctggaagtgaaatggatcccaccacatcactcc
accctcctccctttaggctcctccacccaccccacccttctcaccatccctgaagcgacg
tatggagatggtgggttgtggaggtgtgaattgtgggggaacaaaaccaagctgacgtca
gtggagatcacactgaagatcgagcgagtccccgtggacgtgtggctgttggtcaccatc
tgtgctgcagccgtcatcttcgtcctcctcctcatcctcactgtcatcctcatccgacgc
cacagacagcggatgatgatgcccagacgtggcaaacgcagattctgcaactgcaaagac
cccacaccaaaaggattctacagaaactag

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