Salmo salar (Atlantic salmon): 100136501
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Entry
100136501 CDS
T04363
Name
(RefSeq) hemicentin-1
KO
K06454
T-cell surface glycoprotein CD4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03250
Viral life cycle - HIV-1
sasa03260
Virion - Human immunodeficiency virus
sasa04060
Cytokine-cytokine receptor interaction
sasa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100136501
03260 Virion - Human immunodeficiency virus
100136501
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100136501
04514 Cell adhesion molecules
100136501
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sasa04090
]
100136501
CD molecules [BR:
sasa04090
]
Proteins
100136501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
I-set
Ig_2
Sp38
DUF6249
Motif
Other DBs
NCBI-GeneID:
100136501
NCBI-ProteinID:
XP_014055853
UniProt:
A0A1S3RU77
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Position
ssa05:complement(49728829..49747331)
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AA seq
489 aa
AA seq
DB search
MKYVSGYLSIVIALFISSTGAEDVVYGQVGGMVTLPVLKWGSEKVLVQWYFGMNTQPLIT
RNAQGRETIDPQWKDRLSLSKTDFSLIINKIRLEDFKSFKCELKDFRPQQITSVTSFRLS
HVSVQPVSPLLVGKNLNLKCDIKEIFEGTQRRWLSPQKQDLNKDTRVQIGNDGSLKVMKV
TGQDHGEWTCVVTYQGRETYVNTPVTVIDLSPAHSQPIYTSVSSFSLLHLPCFFSFPLPL
SWSDSQENGIQGGRWTFTPSPAAGSLTGVVQTLVNLSLGPPLAWVVNQKRGLDVSALQKK
NLNLSLSKKGVTVGDRGNYTCAVEFQRDDTLKRVMRVEVLQLFTSPVPVAFVGQEVNLTC
TLGQPLTSDLEVKWIPPHHSTLLPLGSSTHPTLLTIPEATYGDGGLWRCELWGNKTKLTS
VEITLKIERVPVDVWLLVTICAAAVIFVLLLILTVILIRRHRQRMMMPRRGKRRFCNCKD
PTPKGFYRN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatgtttctggatacctttcaatcgttattgctttgttcatctcttcaacaggg
gctgaagatgtggtgtatggtcaggtgggagggatggtcacactccccgtgttgaagtgg
ggttcagaaaaggtgttggtacaatggtactttgggatgaacacacaacctttgataacc
cgcaacgcccaaggtcgagagacgatagatccacagtggaaagacaggctgtctctgtca
aagactgacttctccctgatcatcaacaaaatcagactggaggacttcaaatccttcaaa
tgtgaactgaaagatttcaggccacaacaaattacctcagtcacctcattcagactgtcc
catgtgagtgtacagccagtctctcccttgttggttgggaagaatcttaatctgaagtgt
gacataaaggaaatatttgaggggacacagagaagatggcttagtccccagaaacaggac
ctgaacaaggacacgcgtgtccagatcggaaatgacggcagcctgaaagtaatgaaagtc
actggtcaagaccatggagagtggacctgtgtggtgacataccagggcagggaaacatat
gtcaacacccctgttactgtaatagacctctcccctgctcattcacagcctatctacacc
tctgtctcctccttctctcttctccatctgccatgtttcttttcctttcctctgcctcta
tcctggtcagacagccaggaaaatggcatccagggaggccgctggacctttaccccaagc
ccagcggcaggctccctcactggggttgtccagaccctcgtcaacctctccctggggcct
ccattagcctgggtggtcaatcagaagagaggtctggatgtctcagccctgcagaagaaa
aatctaaacctctccctgtcaaagaaaggggtgacggtgggggacaggggcaactacacc
tgcgctgtggagttccagagggacgacaccctgaagagagtaatgcgtgtggaggtgcta
cagttgtttacctctccagttccagtggcctttgtaggtcaggaggtcaacctcacctgt
accctgggccagcctctgacctctgacctggaagtgaaatggatcccaccacatcactcc
accctcctccctttaggctcctccacccaccccacccttctcaccatccctgaagcgacg
tatggagatggtgggttgtggaggtgtgaattgtgggggaacaaaaccaagctgacgtca
gtggagatcacactgaagatcgagcgagtccccgtggacgtgtggctgttggtcaccatc
tgtgctgcagccgtcatcttcgtcctcctcctcatcctcactgtcatcctcatccgacgc
cacagacagcggatgatgatgcccagacgtggcaaacgcagattctgcaactgcaaagac
cccacaccaaaaggattctacagaaactag
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