Salmo salar (Atlantic salmon): 100195758
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Entry
100195758 CDS
T04363
Symbol
sdf1
Name
(RefSeq) Stromal cell-derived factor 1
KO
K10031
C-X-C motif chemokine 12
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04060
Cytokine-cytokine receptor interaction
sasa04672
Intestinal immune network for IgA production
sasa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100195758 (sdf1)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100195758 (sdf1)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100195758 (sdf1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sasa04052
]
100195758 (sdf1)
00536 Glycosaminoglycan binding proteins [BR:
sasa00536
]
100195758 (sdf1)
Cytokines and neuropeptides [BR:
sasa04052
]
Cytokines
Chemokines
100195758 (sdf1)
Glycosaminoglycan binding proteins [BR:
sasa00536
]
Heparan sulfate / Heparin
Chemokines
100195758 (sdf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
100195758
NCBI-ProteinID:
NP_001134259
UniProt:
B5X7J9
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All DBs
Position
ssa12:complement(12914758..12923727), ssa19:59394704..59410937
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AA seq
99 aa
AA seq
DB search
MDVKVLAVLVLLAVAMDVPPSTAKPISLVERCWCRSTLNTVPQRSIRELKFLHTPNCPFQ
VIAKLKNNREVCINPETKWLQTYLKNAINKVKKSRRRAQ
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaagtactggctgtgttggtcctactggctgtggccatggatgtacctccc
tctacggctaagcccatcagcctggtagagaggtgctggtgtcgctccactctcaacacc
gtccctcagaggagcatcagagagctcaagttccttcacacacccaactgccctttccaa
gtcattgccaagctgaagaacaacagggaggtgtgcattaaccccgagaccaaatggctg
cagacgtacctgaagaatgccattaacaaggtgaagaagtccagaagacgtgctcagtaa
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