Salmo salar (Atlantic salmon): 100196315
Help
Entry
100196315 CDS
T04363
Symbol
plod3
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00310
Lysine degradation
sasa00514
Other types of O-glycan biosynthesis
sasa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100196315 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100196315 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
100196315 (plod3)
Enzymes [BR:
sasa01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
100196315 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
100196315 (plod3)
2.4.1.66 procollagen glucosyltransferase
100196315 (plod3)
Glycosyltransferases [BR:
sasa01003
]
O-Glycan biosynthesis
O-linked Gal type
100196315 (plod3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
Anp1
2OG-FeII_Oxy_3
Motif
Other DBs
NCBI-GeneID:
100196315
NCBI-ProteinID:
XP_014010692
UniProt:
C0H9N6
LinkDB
All DBs
Position
ssa18:31711612..31776328
Genome browser
AA seq
735 aa
AA seq
DB search
MESSCIAVVCVLLLGWMQSSLGAEQRVISPDNLLVITVATEDTDGFTRFMRTSKEFNYTV
KVLGLGEQWKGGDVARTVGGGQKVRWLKTELLKHSDKKDLVILFVDSYDVILASGPEELL
WKFSRLGHRMVFSAEGFCWPDQKLAPKYPAVHTGKRYLNSGGFIGFAPELSEIVQQWKHK
DNDDDQLFYTKIYLDKVQRTKYNMTLDHRSRIFQNLNGAIEEVVLKFEKARVRARNVAYD
TLPVIIHGNGPTKLQLNYLGNYVPTAWTHETGCGICDDDLVYLNDTPDEDMPLVYLSVFI
VQPTPFLEEFLERLTSLNYPTSRIRLFIHNNVVYHEQHIQRFWEKHRVLFPEARLVGPEE
NLQQDQARTMAVEACQKDHQCEYYFSIDADVVIVNPDVLRVLIEENKSVIAPMLSRHGKL
WSNFWGALSPEGFYSRSEDYIDIVQGKRIGLWNVPYITQVYMIKGSVLRGRLSQVSLYSQ
EGMDPDMVFCRAVRDQGVFMFVSNRDEFGRLVSSSNYNTSRLHPDMWQIFDNPLDWKDKY
IHENYSQIFEDNQTVVEQPCPDVYWFPSFTDRMCDDLVETMEDFGEWSGGRHTDERLAGG
YENVPTVDIHMNQIGFEKEWLKFLKEYISPVTEKLYPGYYPKAQAVMNFVVRYRPDEQPS
LRPHHDSSTFTINVALNNKGLDYQGGGCRFLRYDCNVEAPRKGWSFMHPGRLTHYHEGLP
TTSGTRYIMVSFVDP
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgagttgtatcgccgtggtctgtgtgctcctgctcggctggatgcagagcagc
ctcggagcggaacagcgggtcatctctccagataatctcttggtaataacagtagctacg
gaggacactgatggcttcacccgctttatgagaaccagcaaggagtttaactatactgtt
aaggtgctgggtctaggtgagcagtggaagggaggagatgtggcccggactgtaggagga
ggccagaaggttcgctggctgaagactgaactcctcaaacactctgacaagaaggacctg
gtcattctgtttgtggacagttatgatgtgatcctcgccagcggtcctgaagagctgttg
tggaagttttccagactgggtcatcggatggtgttttcagctgagggtttctgttggccc
gaccagaaactggcccccaaataccccgcagtccacaccgggaagagatacctgaactct
ggaggttttataggctttgctccagagctcagtgagatcgttcagcagtggaaacataaa
gacaacgatgatgaccaactcttctacactaagatctacctggacaaagttcaacggacc
aagtacaacatgactctggaccatcgctctagaatcttccagaacctcaacggagccatt
gaggaggtggtgctgaagtttgagaaggctcgtgtccgtgcgaggaacgtggcctatgac
acacttcctgttattatccatggcaacggacccaccaagctccagttgaactacctgggc
aactatgtcccgactgcttggactcacgagaccggctgtgggatctgtgacgacgacctg
gtttacctcaacgacacacctgatgaagacatgcccctggtctacctctctgtgttcatc
gttcagccgactcccttcctggaagagtttctagagagactgaccagcctcaactaccca
accagccgcatcaggctgttcatacacaacaacgtggtgtatcatgagcagcacattcag
cggttctgggagaagcatcgtgttctgttccctgaggccaggctggtcggaccggaggag
aacctacaacaggaccaggctcgaaccatggctgtggaggcgtgtcagaaggaccatcag
tgtgaatactacttcagtatcgatgctgatgtcgttatcgtcaaccctgatgttctccgg
gtcctgatagaagagaacaagtcagtgatagcccccatgttgtccagacatggcaaactg
tggtcgaacttctggggagctctgagtcctgagggattctactctcgatctgaagactac
atcgatatcgtacagggcaagagaatcggtctgtggaacgttccctatataacccaggtc
tacatgataaaggggtcagtcttgagaggtagactgtctcaggtcagtctgtacagtcag
gaggggatggaccctgatatggtgttctgccgggccgtacgagaccagggagtgtttatg
tttgtgtctaatcgagacgagttcggccgtctggtctcctcctccaactacaacaccagc
agactgcatcccgacatgtggcagatctttgacaaccctctggactggaaggacaagtat
atccatgaaaactactctcagatctttgaagacaaccagaccgtcgtggagcagccgtgt
cctgatgtctactggttcccttcctttacagacaggatgtgtgatgatctggtggaaacc
atggaagactttggagaatggagcggaggaagacatacggacgagcgtcttgcagggggc
tatgagaacgtccctactgtggacattcacatgaaccagattggctttgagaaggagtgg
ctcaagtttctgaaagaatacatcagccctgttactgagaaactctacccagggtactac
cccaaggcccaggcggtgatgaactttgtggtccggtatcgtccagacgaacagccatct
ctccgtccgcatcatgactcctccaccttcaccatcaacgtagcgctcaacaacaaggga
ttggattaccagggtggagggtgccggttccttcggtatgactgtaatgttgaagcgcct
cgtaaaggatggtctttcatgcacccaggccgactgactcactaccacgagggtctgcca
acaaccagcgggacgagatacatcatggtttcctttgttgacccctaa
DBGET
integrated database retrieval system
