Salmo salar (Atlantic salmon): 100196560
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Entry
100196560 CDS
T04363
Symbol
ran
Name
(RefSeq) ras-related nuclear protein
KO
K07936
GTP-binding nuclear protein Ran
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03008
Ribosome biogenesis in eukaryotes
sasa03013
Nucleocytoplasmic transport
sasa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100196560 (ran)
03008 Ribosome biogenesis in eukaryotes
100196560 (ran)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100196560 (ran)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100196560 (ran)
03009 Ribosome biogenesis [BR:
sasa03009
]
100196560 (ran)
03016 Transfer RNA biogenesis [BR:
sasa03016
]
100196560 (ran)
03036 Chromosome and associated proteins [BR:
sasa03036
]
100196560 (ran)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
100196560 (ran)
04031 GTP-binding proteins [BR:
sasa04031
]
100196560 (ran)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100196560 (ran)
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100196560 (ran)
Pre-60S particles
100196560 (ran)
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100196560 (ran)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100196560 (ran)
Spindle formation proteins
100196560 (ran)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100196560 (ran)
GTP-binding proteins [BR:
sasa04031
]
Small (monomeric) G-proteins
Ran Family
Ran
100196560 (ran)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RNA_helicase
Gtr1_RagA
G-alpha
ArgoMid
AAA_24
AAA_33
Septin
Pox_A32
AAA_22
AAA_7
TsaE
Motif
Other DBs
NCBI-GeneID:
100196560
NCBI-ProteinID:
NP_001135061
UniProt:
B5XGS6
LinkDB
All DBs
Position
ssa04:complement(16072234..16083309)
Genome browser
AA seq
213 aa
AA seq
DB search
MAEPDVQFKLVLCGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTTRGTIKYNV
WDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNK
VDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVEMPALA
PPEVVMDATLAAQYENDLKVAAETALPDEDDDL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccagatgtacagtttaagctcgtgttgtgcggagatggaggcacaggaaaa
accaccttcgtgaagaggcatttaacgggagagtttgaaaagaaatacgttgcgactctg
ggagtagaggtgcaccccttggtcttccacaccactcgagggaccatcaagtacaacgtc
tgggacacagccggccaggagaagtttggagggctcagagatggctactacatacaggcc
cagtgtgcgatcatcatgttcgacgtcacatctcgcgtcacctacaagaacgtgcccaac
tggcaccgcgacctggtgcgcgtctgcgagaacatacccatagtcctgtgcggaaacaag
gtggacatcaaggacaggaaggtcaaagccaagagcatcgttttccaccgcaagaagaac
cttcagtactacgacatctcagccaagagtaactacaactttgaaaagcccttcctgtgg
ctggccaggaagctggtaggagaccccaacctagagtttgtggagatgccagccctcgcc
cccccggaggtcgtcatggacgccaccctggccgcgcagtacgagaatgaccttaaagtt
gccgcagaaactgctcttccagatgaagacgacgacctttaa
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