KEGG   Salmo salar (Atlantic salmon): 100196560
Entry
100196560         CDS       T04363                                 
Symbol
ran
Name
(RefSeq) ras-related nuclear protein
  KO
K07936  GTP-binding nuclear protein Ran
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03008  Ribosome biogenesis in eukaryotes
sasa03013  Nucleocytoplasmic transport
sasa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100196560 (ran)
   03008 Ribosome biogenesis in eukaryotes
    100196560 (ran)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100196560 (ran)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    100196560 (ran)
   03009 Ribosome biogenesis [BR:sasa03009]
    100196560 (ran)
   03016 Transfer RNA biogenesis [BR:sasa03016]
    100196560 (ran)
   03036 Chromosome and associated proteins [BR:sasa03036]
    100196560 (ran)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    100196560 (ran)
   04031 GTP-binding proteins [BR:sasa04031]
    100196560 (ran)
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     100196560 (ran)
Ribosome biogenesis [BR:sasa03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    100196560 (ran)
  Pre-60S particles
    100196560 (ran)
Transfer RNA biogenesis [BR:sasa03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    100196560 (ran)
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     100196560 (ran)
   Spindle formation proteins
    100196560 (ran)
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100196560 (ran)
GTP-binding proteins [BR:sasa04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    100196560 (ran)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RNA_helicase Gtr1_RagA G-alpha ArgoMid AAA_24 AAA_33 Septin Pox_A32 AAA_22 AAA_7 TsaE
Other DBs
NCBI-GeneID: 100196560
NCBI-ProteinID: NP_001135061
UniProt: B5XGS6
LinkDB
Position
ssa04:complement(16072234..16083309)
AA seq 213 aa
MAEPDVQFKLVLCGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTTRGTIKYNV
WDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNK
VDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVEMPALA
PPEVVMDATLAAQYENDLKVAAETALPDEDDDL
NT seq 642 nt   +upstreamnt  +downstreamnt
atggcagaaccagatgtacagtttaagctcgtgttgtgcggagatggaggcacaggaaaa
accaccttcgtgaagaggcatttaacgggagagtttgaaaagaaatacgttgcgactctg
ggagtagaggtgcaccccttggtcttccacaccactcgagggaccatcaagtacaacgtc
tgggacacagccggccaggagaagtttggagggctcagagatggctactacatacaggcc
cagtgtgcgatcatcatgttcgacgtcacatctcgcgtcacctacaagaacgtgcccaac
tggcaccgcgacctggtgcgcgtctgcgagaacatacccatagtcctgtgcggaaacaag
gtggacatcaaggacaggaaggtcaaagccaagagcatcgttttccaccgcaagaagaac
cttcagtactacgacatctcagccaagagtaactacaactttgaaaagcccttcctgtgg
ctggccaggaagctggtaggagaccccaacctagagtttgtggagatgccagccctcgcc
cccccggaggtcgtcatggacgccaccctggccgcgcagtacgagaatgaccttaaagtt
gccgcagaaactgctcttccagatgaagacgacgacctttaa

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